Detailed information NTG0390242

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: FSC11_RS01440
• Genome accession: NZ_CP044483
• Coordinates: 307993..310092 (+)
• Length: 699 a.a.
• NCBI ID: WP_163164722.1
• Uniprot ID: -
• Organism: Acinetobacter schindleri strain HZE30-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 302993..315092

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FSC11_RS01420 (FSC11_01425)	pilM	305037..306095 (+)	1059	WP_004810013.1	pilus assembly protein PilM	Machinery gene
FSC11_RS01425 (FSC11_01430)	comN	306095..306736 (+)	642	WP_163164720.1	PilN domain-containing protein	Machinery gene
FSC11_RS01430 (FSC11_01435)	comO	306730..307449 (+)	720	WP_026056744.1	type 4a pilus biogenesis protein PilO	Machinery gene
FSC11_RS01435 (FSC11_01440)	pilP	307449..307976 (+)	528	WP_004810006.1	pilus assembly protein PilP	Machinery gene
FSC11_RS01440 (FSC11_01445)	pilQ	307993..310092 (+)	2100	WP_163164722.1	type IV pilus secretin PilQ family protein	Machinery gene
FSC11_RS01445 (FSC11_01450)	aroK	310129..310665 (+)	537	WP_004896271.1	shikimate kinase AroK	-
FSC11_RS01450 (FSC11_01455)	aroB	310693..311772 (+)	1080	WP_163164724.1	3-dehydroquinate synthase	-
FSC11_RS01455 (FSC11_01460)	-	311786..312628 (+)	843	WP_163164726.1	hypothetical protein	-

Sequence

Protein

• Length: 699 a.a.
• Molecular weight: 76132.22 Da
• Isoelectric Point: 5.1407

>NTDB_id=390242 FSC11_RS01440 WP_163164722.1 307993..310092(+) (pilQ) [Acinetobacter schindleri strain HZE30-1]
MNKSFKEFIFGDANTMNHVFRQFSMGAVAIAVMQAASAQVSMTNVVPMQIPGQGTEIRVMFNGLPPQPQAYQLESPSRLI
LDFDKAQQNLKQSSIAVATKEASSVDVTSDAQRARLTVNLADAGAFTTRVEGNTFILKINSTNPVIPVQPVVQQNTQGIT
NIGFQRGAKGEGQVVIDLASGNTPVDVQQQGTKVIVRALGSKIPAHLTRRLNVNDFATPVSTVDAVNQNGSGVITIQTSD
SYEYMAYQTDNKLTISLKRPEEKNPLRPKAVQHYTGKKISLDFQDIEVRRVLQLLADFTDINMVAADSVQGNITLRLKEV
PWDQALDIVLKTKNLDKRRNGNVIWIAPVSELIKAEEEEAKALAQSVKLAPIQTEYMQLSYAKAADIEKLITQNKGASST
GSNSGSTSGDDKESLLSSRGSISIDTRTNTLIINDTQPFIDKIRNMVDLLDVQVKQVMVEARIVTAETNFSRDLGIRWGL
QRNNPSLSAGPNGSNVWGGDYSPKLDLSVDLGTPTAGTFSFGILKISDYMLDLQLTALQSDGMGEVLSAPKILTGDKQKA
YILRGTEIPYQSYSAEGGTTTSFKEANLKLEVTPSITPDGKVQMELTIEKDSIGELTSDGPAINTNELQTNVLVNDGETV
VLGGIFDDFKSNQYQKVPFLGDLPVIGNLFKNNSKVSEQAELLIFVTPRIVNDSVSRNH

Nucleotide

• Length: 2100 bp

>NTDB_id=390242 FSC11_RS01440 WP_163164722.1 307993..310092(+) (pilQ) [Acinetobacter schindleri strain HZE30-1]
ATGAATAAAAGTTTTAAAGAATTTATTTTTGGGGATGCTAATACAATGAATCATGTGTTTCGTCAGTTTTCAATGGGGGC
AGTTGCCATTGCTGTTATGCAGGCGGCAAGTGCACAGGTTTCGATGACCAATGTGGTGCCAATGCAAATTCCAGGACAAG
GTACTGAAATTCGTGTGATGTTTAATGGCTTGCCACCTCAACCACAAGCTTATCAATTAGAATCACCATCACGTCTGATT
CTGGATTTTGATAAAGCACAGCAGAATTTAAAGCAAAGCAGTATTGCTGTTGCAACGAAAGAAGCAAGTTCTGTAGATGT
GACTTCAGATGCCCAGCGTGCACGTTTAACTGTGAATCTGGCTGATGCGGGTGCATTTACCACGCGTGTTGAAGGCAATA
CCTTTATTCTAAAAATCAATTCAACCAATCCAGTTATCCCTGTACAGCCAGTCGTACAACAAAATACTCAAGGCATTACC
AATATTGGGTTCCAGCGCGGGGCGAAAGGTGAAGGTCAGGTCGTGATCGATCTGGCGAGTGGTAATACACCGGTTGATGT
ACAACAGCAAGGCACTAAAGTTATTGTACGGGCATTAGGCTCCAAGATCCCGGCACATTTAACCCGTCGTCTGAATGTGA
ATGATTTTGCTACACCTGTTTCGACAGTAGATGCAGTCAACCAGAATGGCTCTGGAGTGATTACCATTCAAACTTCAGAC
AGCTATGAATACATGGCTTATCAAACCGATAATAAACTGACAATTAGTTTAAAACGCCCAGAAGAGAAAAATCCATTACG
TCCAAAAGCTGTTCAACATTATACCGGTAAGAAAATTTCTTTAGATTTTCAGGATATTGAAGTACGCCGAGTATTACAGC
TGCTAGCAGATTTTACTGACATTAATATGGTTGCAGCAGACAGCGTACAAGGCAATATTACTTTACGTCTTAAGGAAGTG
CCTTGGGATCAGGCTTTAGATATTGTTTTAAAGACTAAGAACTTGGACAAACGTCGTAATGGTAATGTGATCTGGATCGC
GCCTGTATCTGAGCTCATTAAAGCTGAAGAAGAAGAAGCCAAAGCACTTGCACAAAGTGTAAAGCTTGCTCCTATTCAGA
CAGAGTATATGCAACTCAGTTATGCCAAAGCAGCGGATATTGAAAAGCTCATCACGCAAAATAAAGGAGCCTCAAGTACC
GGTTCTAATTCAGGTAGTACAAGTGGAGATGATAAGGAAAGTCTACTGAGTTCTCGTGGCTCAATTTCAATTGATACTCG
TACAAATACATTAATTATTAATGACACACAGCCCTTCATTGATAAAATCCGTAATATGGTCGATCTGCTTGATGTACAGG
TAAAGCAGGTGATGGTTGAAGCACGTATTGTAACGGCAGAGACAAATTTTTCCCGTGATTTGGGCATACGTTGGGGATTG
CAGCGTAATAATCCTAGTTTAAGCGCTGGTCCTAATGGTTCTAATGTCTGGGGTGGCGATTATTCTCCAAAATTAGATTT
AAGTGTAGATTTAGGTACACCTACCGCCGGAACCTTTAGCTTTGGAATATTAAAGATTTCCGATTATATGCTTGATCTAC
AATTAACTGCATTACAGTCCGATGGAATGGGGGAGGTACTCTCGGCTCCTAAAATTCTTACTGGTGATAAGCAAAAAGCT
TATATCTTAAGAGGTACAGAGATTCCTTATCAATCATATAGTGCGGAAGGTGGTACAACAACTTCATTTAAAGAGGCAAA
CCTTAAGTTAGAAGTAACGCCGAGTATTACTCCTGATGGAAAAGTACAGATGGAACTTACAATTGAAAAAGATTCAATTG
GAGAGCTTACCTCTGACGGTCCAGCAATTAATACGAATGAACTGCAAACTAACGTGCTAGTAAATGATGGAGAGACTGTT
GTATTGGGAGGTATTTTTGATGATTTTAAATCAAATCAATACCAAAAAGTGCCTTTTCTTGGAGATCTGCCTGTTATTGG
GAATTTATTCAAGAATAACAGTAAAGTTTCGGAACAAGCCGAGCTCCTGATTTTTGTTACACCTCGAATTGTTAATGACA
GTGTTTCAAGAAATCATTAA

Domains

Predicted by InterproScan.

• AMIN domain (AMIN) (55-135)

• Bacterial type II and III secretion system protein (Secretin) (537-691)

• Secretin and TonB N terminus short domain (STN) (306-348)

• Bacterial type II/III secretion system short domain (Secretin_N) (376-456)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	65.881	100	0.68
pilQ	Acinetobacter baumannii strain A118	65.742	100	0.678
comQ	Acinetobacter baylyi ADP1	63.904	100	0.651
pilQ	Pseudomonas aeruginosa PAK	42.878	98.426	0.422
pilQ	Legionella pneumophila strain Lp02	38.607	98.569	0.381
pilQ	Legionella pneumophila strain ERS1305867	38.799	97.711	0.379
pilQ	Neisseria gonorrhoeae strain FA1090	34.521	100	0.361