Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | FSC11_RS01425 | Genome accession | NZ_CP044483 |
| Coordinates | 306095..306736 (+) | Length | 213 a.a. |
| NCBI ID | WP_163164720.1 | Uniprot ID | - |
| Organism | Acinetobacter schindleri strain HZE30-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 301095..311736
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FSC11_RS01410 (FSC11_01415) | - | 301464..302267 (+) | 804 | WP_004896278.1 | putative RNA methyltransferase | - |
| FSC11_RS01415 (FSC11_01420) | ponA | 302339..304867 (-) | 2529 | WP_163164718.1 | penicillin-binding protein PBP1a | - |
| FSC11_RS01420 (FSC11_01425) | pilM | 305037..306095 (+) | 1059 | WP_004810013.1 | pilus assembly protein PilM | Machinery gene |
| FSC11_RS01425 (FSC11_01430) | comN | 306095..306736 (+) | 642 | WP_163164720.1 | PilN domain-containing protein | Machinery gene |
| FSC11_RS01430 (FSC11_01435) | comO | 306730..307449 (+) | 720 | WP_026056744.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FSC11_RS01435 (FSC11_01440) | pilP | 307449..307976 (+) | 528 | WP_004810006.1 | pilus assembly protein PilP | Machinery gene |
| FSC11_RS01440 (FSC11_01445) | pilQ | 307993..310092 (+) | 2100 | WP_163164722.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| FSC11_RS01445 (FSC11_01450) | aroK | 310129..310665 (+) | 537 | WP_004896271.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 23801.07 Da Isoelectric Point: 4.8970
>NTDB_id=390239 FSC11_RS01425 WP_163164720.1 306095..306736(+) (comN) [Acinetobacter schindleri strain HZE30-1]
MAKINLLPWRDELRIKRNNEFVAYCVGALLLGVTAAGGSWFYYDQKLQDQEQANQLIISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQTQRPIAVHLIDEIVRVTPSDMYITRFVRSGDKFTIEGKAASPNTVAELLRNLEASTWYRNAFMNAFLV
AEENKDKAPSSIIPRVEESYGTFTVTVDLDQIAQPVLSEQQPQAAAAIGGATS
MAKINLLPWRDELRIKRNNEFVAYCVGALLLGVTAAGGSWFYYDQKLQDQEQANQLIISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQTQRPIAVHLIDEIVRVTPSDMYITRFVRSGDKFTIEGKAASPNTVAELLRNLEASTWYRNAFMNAFLV
AEENKDKAPSSIIPRVEESYGTFTVTVDLDQIAQPVLSEQQPQAAAAIGGATS
Nucleotide
Download Length: 642 bp
>NTDB_id=390239 FSC11_RS01425 WP_163164720.1 306095..306736(+) (comN) [Acinetobacter schindleri strain HZE30-1]
ATGGCAAAAATTAACTTACTTCCTTGGCGTGATGAGCTCAGGATAAAAAGAAATAACGAATTTGTCGCATATTGCGTCGG
GGCCTTGTTGCTAGGGGTAACAGCAGCTGGAGGAAGCTGGTTCTACTATGATCAAAAATTACAGGATCAAGAACAAGCCA
ACCAACTCATCATCAGTACCAATCAGAATCTGGATGTACAGCTAAAATCTCTGGAAGGTTTACAGGAACAGCGTAATGCG
ATTGTGGAACGCATGAAACTGATTCAAGGTTTACAAACCCAGCGTCCAATTGCCGTACATCTTATTGACGAGATTGTACG
TGTGACACCAAGTGATATGTATATCACCAGATTTGTTCGTAGTGGTGATAAGTTCACTATTGAAGGGAAAGCAGCAAGTC
CAAATACGGTTGCAGAATTATTGCGTAATCTCGAAGCTTCTACCTGGTACCGTAATGCTTTCATGAATGCATTCCTGGTG
GCGGAAGAGAACAAGGACAAGGCGCCAAGCTCTATTATTCCACGTGTTGAAGAATCTTATGGCACATTTACAGTGACAGT
GGATCTAGACCAGATTGCTCAACCGGTGCTTTCAGAACAACAGCCGCAAGCGGCTGCAGCAATAGGAGGGGCGACATCAT
GA
ATGGCAAAAATTAACTTACTTCCTTGGCGTGATGAGCTCAGGATAAAAAGAAATAACGAATTTGTCGCATATTGCGTCGG
GGCCTTGTTGCTAGGGGTAACAGCAGCTGGAGGAAGCTGGTTCTACTATGATCAAAAATTACAGGATCAAGAACAAGCCA
ACCAACTCATCATCAGTACCAATCAGAATCTGGATGTACAGCTAAAATCTCTGGAAGGTTTACAGGAACAGCGTAATGCG
ATTGTGGAACGCATGAAACTGATTCAAGGTTTACAAACCCAGCGTCCAATTGCCGTACATCTTATTGACGAGATTGTACG
TGTGACACCAAGTGATATGTATATCACCAGATTTGTTCGTAGTGGTGATAAGTTCACTATTGAAGGGAAAGCAGCAAGTC
CAAATACGGTTGCAGAATTATTGCGTAATCTCGAAGCTTCTACCTGGTACCGTAATGCTTTCATGAATGCATTCCTGGTG
GCGGAAGAGAACAAGGACAAGGCGCCAAGCTCTATTATTCCACGTGTTGAAGAATCTTATGGCACATTTACAGTGACAGT
GGATCTAGACCAGATTGCTCAACCGGTGCTTTCAGAACAACAGCCGCAAGCGGCTGCAGCAATAGGAGGGGCGACATCAT
GA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Acinetobacter baylyi ADP1 |
67.464 |
98.122 |
0.662 |
| pilN | Acinetobacter baumannii D1279779 |
66.038 |
99.531 |
0.657 |