Detailed information NTG0388862

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: F5989_RS07530
• Genome accession: NZ_CP044221
• Coordinates: 1513021..1513416 (+)
• Length: 131 a.a.
• NCBI ID: WP_002269471.1
• Uniprot ID: A0A829BS80
• Organism: Streptococcus mutans strain NCH105
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1508021..1518416

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F5989_RS07490 (F5989_07625)	-	1508119..1508781 (+)	663	WP_002266816.1	CPBP family intramembrane glutamic endopeptidase	-
F5989_RS07495 (F5989_07630)	proC	1508867..1509637 (-)	771	WP_002267840.1	pyrroline-5-carboxylate reductase	-
F5989_RS07500 (F5989_07635)	pepA	1509693..1510760 (-)	1068	WP_002264005.1	glutamyl aminopeptidase	-
F5989_RS07505 (F5989_07640)	-	1510820..1511128 (+)	309	WP_002277067.1	DUF4651 domain-containing protein	-
F5989_RS07510 (F5989_07645)	-	1511106..1511435 (+)	330	WP_002264003.1	thioredoxin family protein	-
F5989_RS07515 (F5989_07650)	ytpR	1511432..1512058 (+)	627	WP_002267841.1	YtpR family tRNA-binding protein	-
F5989_RS07520 (F5989_07655)	-	1512147..1512578 (+)	432	WP_018110218.1	MarR family winged helix-turn-helix transcriptional regulator	-
F5989_RS07525 (F5989_07660)	-	1512578..1512934 (+)	357	WP_002264000.1	rhodanese-like domain-containing protein	-
F5989_RS07530 (F5989_07665)	ssbA	1513021..1513416 (+)	396	WP_002269471.1	single-stranded DNA-binding protein	Machinery gene
F5989_RS07535 (F5989_07670)	-	1513832..1514794 (+)	963	WP_002263455.1	sugar ABC transporter substrate-binding protein	-
F5989_RS07540 (F5989_07675)	-	1514794..1516116 (+)	1323	WP_002263456.1	sensor histidine kinase	-
F5989_RS07545 (F5989_07680)	-	1516116..1516796 (+)	681	WP_002263457.1	response regulator transcription factor	-
F5989_RS07550 (F5989_07685)	-	1516789..1518096 (+)	1308	WP_002267844.1	extracellular solute-binding protein	-
F5989_RS10290 (F5989_07690)	-	1518162..1518365 (+)	204	Protein_1420	hypothetical protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14853.96 Da
• Isoelectric Point: 6.4855

>NTDB_id=388862 F5989_RS07530 WP_002269471.1 1513021..1513416(+) (ssbA) [Streptococcus mutans strain NCH105]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGEKQADFVNVVLWGRLAEIIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=388862 F5989_RS07530 WP_002269471.1 1513021..1513416(+) (ssbA) [Streptococcus mutans strain NCH105]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAAGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAATAATAGCTTCCTATGGTAGTAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTGGAAGAGGAGGAACTCCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: A0A829BS80

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	99.237	100	0.992
ssbB	Streptococcus sobrinus strain NIDR 6715-7	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae TIGR4	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae Rx1	74.046	100	0.74
ssbB/cilA	Streptococcus pneumoniae D39	74.046	100	0.74
ssbB/cilA	Streptococcus pneumoniae R6	74.046	100	0.74
ssbB/cilA	Streptococcus mitis SK321	74.046	100	0.74
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.733
ssbB	Lactococcus lactis subsp. cremoris KW2	57.143	85.496	0.489
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405