Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | FOB75_RS07825 | Genome accession | NZ_CP044062 |
| Coordinates | 1541560..1541844 (-) | Length | 94 a.a. |
| NCBI ID | WP_021449594.1 | Uniprot ID | - |
| Organism | Vibrio parahaemolyticus strain FDAARGOS_667 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1536560..1546844
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB75_RS07800 (FOB75_07800) | - | 1537054..1538268 (+) | 1215 | WP_005456922.1 | pyridoxal phosphate-dependent aminotransferase | - |
| FOB75_RS07805 (FOB75_07805) | yfbR | 1538359..1538943 (+) | 585 | WP_005482513.1 | 5'-deoxynucleotidase | - |
| FOB75_RS07810 (FOB75_07810) | - | 1538956..1540290 (+) | 1335 | WP_190970700.1 | anti-phage deoxyguanosine triphosphatase | - |
| FOB75_RS07815 (FOB75_07815) | - | 1540300..1540914 (-) | 615 | WP_005456903.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| FOB75_RS07820 (FOB75_07820) | rrtA | 1540918..1541469 (+) | 552 | WP_062888446.1 | rhombosortase | - |
| FOB75_RS07825 (FOB75_07825) | comEA | 1541560..1541844 (-) | 285 | WP_021449594.1 | ComEA family DNA-binding protein | Machinery gene |
| FOB75_RS07830 (FOB75_07830) | ppiD | 1541995..1543854 (-) | 1860 | WP_069531681.1 | peptidylprolyl isomerase | - |
| FOB75_RS07835 (FOB75_07835) | - | 1544054..1544326 (-) | 273 | WP_005382341.1 | HU family DNA-binding protein | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10249.91 Da Isoelectric Point: 5.8425
>NTDB_id=387285 FOB75_RS07825 WP_021449594.1 1541560..1541844(-) (comEA) [Vibrio parahaemolyticus strain FDAARGOS_667]
MKWILTLCLVVFAPLSLAADTKADKYEGIEITVNINTASAEEIATMLKGIGEKKAQSIVDYRTEHGPFKTAADLTNVKGI
GEATIKKNEDRILL
MKWILTLCLVVFAPLSLAADTKADKYEGIEITVNINTASAEEIATMLKGIGEKKAQSIVDYRTEHGPFKTAADLTNVKGI
GEATIKKNEDRILL
Nucleotide
Download Length: 285 bp
>NTDB_id=387285 FOB75_RS07825 WP_021449594.1 1541560..1541844(-) (comEA) [Vibrio parahaemolyticus strain FDAARGOS_667]
ATGAAATGGATTTTAACCTTGTGTTTAGTGGTGTTCGCACCACTCAGTTTGGCCGCTGATACCAAGGCTGATAAATATGA
AGGAATTGAAATTACGGTCAATATCAATACTGCTTCTGCAGAAGAGATAGCAACGATGCTGAAAGGTATTGGCGAAAAGA
AAGCGCAAAGCATAGTTGACTACCGTACTGAGCACGGCCCATTTAAAACAGCAGCTGATTTAACCAATGTGAAAGGAATT
GGTGAAGCAACCATCAAGAAAAACGAAGACCGCATTCTTCTATAA
ATGAAATGGATTTTAACCTTGTGTTTAGTGGTGTTCGCACCACTCAGTTTGGCCGCTGATACCAAGGCTGATAAATATGA
AGGAATTGAAATTACGGTCAATATCAATACTGCTTCTGCAGAAGAGATAGCAACGATGCTGAAAGGTATTGGCGAAAAGA
AAGCGCAAAGCATAGTTGACTACCGTACTGAGCACGGCCCATTTAAAACAGCAGCTGATTTAACCAATGTGAAAGGAATT
GGTGAAGCAACCATCAAGAAAAACGAAGACCGCATTCTTCTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
100 |
100 |
1 |
| comEA | Vibrio campbellii strain DS40M4 |
77.895 |
100 |
0.787 |
| comEA | Vibrio cholerae C6706 |
62.766 |
100 |
0.628 |
| comEA | Vibrio cholerae strain A1552 |
62.766 |
100 |
0.628 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
56.452 |
65.957 |
0.372 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
56.452 |
65.957 |
0.372 |
| comE | Neisseria gonorrhoeae MS11 |
38.889 |
95.745 |
0.372 |
| comE | Neisseria gonorrhoeae MS11 |
38.889 |
95.745 |
0.372 |
| comE | Neisseria gonorrhoeae MS11 |
38.889 |
95.745 |
0.372 |
| comE | Neisseria gonorrhoeae MS11 |
38.889 |
95.745 |
0.372 |
| comEA | Acinetobacter baylyi ADP1 |
47.222 |
76.596 |
0.362 |