Detailed information NTG0380291

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: FXO11_RS13140
• Genome accession: NZ_CP043042
• Coordinates: 2955745..2956965 (+)
• Length: 406 a.a.
• NCBI ID: WP_148863394.1
• Uniprot ID: -
• Organism: Marinobacter fonticola strain CS412
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2950745..2961965

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FXO11_RS13125	-	2951414..2952937 (-)	1524	WP_148863391.1	O-antigen ligase	-
FXO11_RS13130	-	2953218..2953664 (-)	447	WP_148863392.1	pilin	-
FXO11_RS13135	pilB	2954027..2955742 (+)	1716	WP_148863393.1	type IV-A pilus assembly ATPase PilB	Machinery gene
FXO11_RS13140	pilC	2955745..2956965 (+)	1221	WP_148863394.1	type II secretion system F family protein	Machinery gene
FXO11_RS13145	pilD	2957053..2957928 (+)	876	WP_148863395.1	A24 family peptidase	Machinery gene
FXO11_RS13150	coaE	2957976..2958602 (+)	627	WP_148863396.1	dephospho-CoA kinase	-
FXO11_RS13155	-	2958680..2959132 (+)	453	WP_148863397.1	HIT family protein	-
FXO11_RS13160	-	2959107..2960177 (+)	1071	WP_227545901.1	hypothetical protein	-
FXO11_RS13165	tsaA	2960174..2960914 (+)	741	WP_148863398.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 44191.03 Da
• Isoelectric Point: 9.5503

>NTDB_id=380291 FXO11_RS13140 WP_148863394.1 2955745..2956965(+) (pilC) [Marinobacter fonticola strain CS412]
MAENAQKLSTFLWEGKDRKGNKTKGEVSGTNLALVKAQLRKQGIMPSKVKKKPKPLFGGTKKITPFDIAMLTRQLATMMK
AGVPLVQSFDIVADGLDHKGLQELVVTIRNDIAAGTSFAGALKRHPRHFDDLYCNLVDSGERAGALEQMLERIAVYLEKT
EGLKKKIKKAMTYPIAVVVVAIIVTAILLVKVVPQFESLFQGFGADLPVFTQMVVNLSEWMQAWWFVVLLSIVGGIFLFK
EANRRSQKFSDAIDRLVLKIPVMGEIIDKGAVAKFGRVLSTTFAAGVPLVDALDSVSGATGNAVYRDAVRKIKDEVSSGT
QLQAAMKQTDAFPVMAIQLTAIGEESGNLDEMLSKVADHYEGVVDDMVDNLTALMEPMIMSVLGVLVGGLIIAMYLPIFQ
MGQVVG

Nucleotide

• Length: 1221 bp

>NTDB_id=380291 FXO11_RS13140 WP_148863394.1 2955745..2956965(+) (pilC) [Marinobacter fonticola strain CS412]
ATGGCAGAAAATGCGCAAAAGCTGTCTACCTTCTTATGGGAAGGCAAGGACCGCAAAGGTAACAAAACCAAAGGCGAGGT
TTCAGGCACTAACCTTGCGCTGGTGAAAGCCCAACTGCGAAAGCAGGGCATCATGCCCAGCAAGGTCAAGAAAAAGCCAA
AGCCGCTGTTCGGTGGGACCAAAAAAATCACGCCTTTCGACATTGCGATGCTGACGCGGCAATTGGCGACCATGATGAAG
GCAGGCGTCCCTCTTGTGCAAAGCTTCGATATTGTTGCCGATGGGCTTGATCATAAGGGTCTTCAGGAGCTGGTGGTCAC
CATTCGAAACGATATCGCGGCGGGCACCAGCTTTGCTGGCGCACTCAAACGCCATCCGCGCCACTTTGATGACCTCTATT
GCAACTTGGTTGACTCCGGCGAACGCGCTGGTGCGCTTGAGCAGATGCTTGAGCGGATTGCGGTGTACCTGGAGAAAACT
GAGGGCCTGAAGAAAAAGATCAAGAAAGCCATGACCTACCCGATCGCTGTTGTGGTGGTCGCAATTATCGTAACAGCTAT
CCTTCTGGTGAAAGTCGTACCACAGTTCGAAAGCTTGTTCCAAGGTTTTGGTGCCGATCTTCCCGTCTTTACACAGATGG
TTGTCAATCTCTCGGAGTGGATGCAGGCGTGGTGGTTTGTGGTTCTACTGAGTATTGTCGGTGGTATCTTTCTTTTCAAA
GAGGCCAATCGACGGTCGCAGAAGTTCTCTGACGCCATTGATCGCCTAGTGCTAAAGATTCCGGTGATGGGCGAAATTAT
TGATAAGGGAGCTGTGGCCAAGTTTGGTCGCGTTCTTTCAACAACATTCGCTGCTGGTGTGCCCCTTGTTGATGCTCTCG
ACTCAGTCTCAGGCGCGACAGGTAACGCCGTTTACCGTGATGCAGTGCGTAAAATAAAAGACGAGGTCTCATCCGGAACA
CAACTCCAAGCGGCCATGAAACAAACCGATGCCTTTCCCGTTATGGCCATACAGTTGACTGCCATTGGTGAGGAGTCGGG
CAACTTGGACGAAATGCTGTCAAAAGTGGCGGACCACTACGAGGGTGTTGTCGATGATATGGTCGATAACCTCACGGCTC
TTATGGAGCCGATGATTATGTCGGTGCTAGGTGTCCTTGTCGGCGGCTTGATCATCGCCATGTATCTACCGATCTTCCAG
ATGGGGCAAGTTGTAGGCTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (72-194)

• Type II secretion system (T2SS), protein F (T2SSF) (277-397)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Pseudomonas stutzeri DSM 10701	66.42	99.754	0.663
pilC	Acinetobacter baylyi ADP1	57.635	100	0.576
pilC	Acinetobacter baumannii D1279779	57.531	99.754	0.574
pilC	Legionella pneumophila strain ERS1305867	54.68	100	0.547
pilG	Neisseria gonorrhoeae MS11	41.872	100	0.419
pilG	Neisseria meningitidis 44/76-A	41.626	100	0.416
pilC	Vibrio cholerae strain A1552	40.75	98.522	0.401
pilC	Vibrio campbellii strain DS40M4	40.049	100	0.401