Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   FSZ17_RS10255 Genome accession   NZ_CP042593
Coordinates   2167577..2168830 (+) Length   417 a.a.
NCBI ID   WP_057769950.1    Uniprot ID   A0A5B8Z3E9
Organism   Cytobacillus dafuensis strain FJAT-25496     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 2162577..2173830
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSZ17_RS10230 (FSZ17_10230) ymfI 2163636..2164358 (+) 723 WP_057769944.1 elongation factor P 5-aminopentanone reductase -
  FSZ17_RS10235 (FSZ17_10235) - 2164672..2164932 (+) 261 WP_057769945.1 DUF3243 domain-containing protein -
  FSZ17_RS10240 (FSZ17_10240) - 2165136..2165930 (+) 795 WP_057769946.1 DUF3388 domain-containing protein -
  FSZ17_RS10245 (FSZ17_10245) - 2165949..2166863 (+) 915 WP_057769948.1 RodZ domain-containing protein -
  FSZ17_RS10250 (FSZ17_10250) pgsA 2166914..2167492 (+) 579 WP_057769949.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  FSZ17_RS10255 (FSZ17_10255) cinA 2167577..2168830 (+) 1254 WP_057769950.1 competence/damage-inducible protein A Machinery gene
  FSZ17_RS10260 (FSZ17_10260) recA 2169100..2170140 (+) 1041 WP_057769951.1 recombinase RecA Machinery gene
  FSZ17_RS10265 (FSZ17_10265) rny 2170460..2172028 (+) 1569 WP_057769952.1 ribonuclease Y -
  FSZ17_RS10270 (FSZ17_10270) - 2172130..2172927 (+) 798 WP_057769954.1 TIGR00282 family metallophosphoesterase -
  FSZ17_RS10275 (FSZ17_10275) spoVS 2173404..2173664 (+) 261 WP_009791522.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 417 a.a.        Molecular weight: 46100.76 Da        Isoelectric Point: 4.7524

>NTDB_id=378586 FSZ17_RS10255 WP_057769950.1 2167577..2168830(+) (cinA) [Cytobacillus dafuensis strain FJAT-25496]
MNAEIIAVGSELLLGQIVNTNARFISQQLAELGINVYYHTVVGDNPQRLKDAIEIAESRSNLIIFTGGLGPTKDDLTKET
IARHLNKQLIMDEQALKQIELYFERSNRIMTENNKKQAIILEDSQVLPNEHGMAPGMLLDTDNHLYMLLPGPPKEMEPMF
LKYGYSILRTKLHDEDVIVSRVLRFFGIGEAMLETEIEDLIDSQSNPTIAPLASDGEVTLRLTAKHNQKETALQLLDETE
EAILSRVGHYFYGYDDTSLMNETVKLLNDKALTISCAESLTGGMFQQEITSIPGASAILKGGVVCYTNEVKTNVLNISKK
TIEEEGVVSAQCALELAENVSKMMNADIGISFTGVAGPDQLEGKTIGTVYIGIFINGQPIHVEELNFGGTRESIRARSVK
YGCYLLIKSLKRNQSAK

Nucleotide


Download         Length: 1254 bp        

>NTDB_id=378586 FSZ17_RS10255 WP_057769950.1 2167577..2168830(+) (cinA) [Cytobacillus dafuensis strain FJAT-25496]
ATGAATGCAGAAATCATTGCTGTTGGTTCTGAATTATTACTAGGTCAGATTGTCAATACAAATGCTCGTTTTATATCACA
ACAGCTTGCTGAACTAGGGATAAATGTATACTATCATACAGTTGTTGGAGATAATCCCCAACGTCTTAAGGATGCAATAG
AAATTGCTGAAAGCCGTTCTAATCTTATTATTTTTACTGGAGGATTAGGTCCGACAAAGGATGATTTGACAAAAGAAACT
ATTGCTCGCCATTTAAACAAACAACTAATTATGGATGAACAAGCACTAAAGCAAATTGAACTTTATTTTGAGCGTTCCAA
TAGAATTATGACAGAAAATAATAAAAAGCAAGCAATTATTTTAGAAGATTCGCAAGTGTTGCCAAATGAGCATGGTATGG
CTCCTGGGATGCTGCTAGATACTGATAATCATTTGTATATGCTTCTTCCAGGGCCGCCAAAAGAAATGGAACCGATGTTT
TTAAAATATGGTTATTCCATCCTTCGTACAAAGCTTCATGATGAGGATGTAATTGTTTCTAGGGTATTAAGATTTTTCGG
AATCGGTGAAGCGATGTTGGAAACGGAAATTGAGGATTTGATAGATTCTCAAAGCAATCCAACTATTGCACCGCTTGCTT
CAGATGGAGAGGTCACCCTTAGATTGACTGCCAAACATAATCAAAAGGAAACTGCACTGCAGTTATTAGATGAAACAGAG
GAAGCAATACTATCCCGTGTCGGTCATTATTTTTATGGTTATGATGATACATCCCTTATGAATGAGACTGTAAAATTGTT
AAATGACAAAGCACTAACGATTAGTTGTGCGGAAAGTTTAACGGGAGGTATGTTCCAGCAGGAAATTACATCCATACCAG
GTGCAAGTGCTATTCTCAAAGGCGGTGTTGTTTGCTATACGAATGAAGTAAAGACTAATGTTCTTAATATCTCTAAAAAG
ACAATTGAGGAAGAAGGCGTCGTAAGCGCACAGTGTGCTTTAGAATTAGCAGAAAATGTTTCTAAAATGATGAATGCTGA
TATTGGTATTAGCTTTACTGGAGTTGCAGGACCTGATCAACTCGAAGGAAAGACCATAGGAACCGTTTATATAGGAATTT
TCATAAATGGGCAACCGATTCATGTAGAAGAACTTAATTTTGGAGGAACGAGAGAATCCATTCGTGCAAGAAGTGTAAAA
TATGGATGTTACCTTTTAATAAAGAGTTTGAAAAGAAATCAGAGTGCGAAATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(257-409)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5B8Z3E9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

59.024

98.321

0.58
  cinA Streptococcus mitis NCTC 12261

47.867

100

0.484
  cinA Streptococcus mitis SK321

47.619

100

0.48
  cinA Streptococcus pneumoniae TIGR4

47.619

100

0.48
  cinA Streptococcus pneumoniae Rx1

47.143

100

0.475
  cinA Streptococcus pneumoniae R6

47.143

100

0.475
  cinA Streptococcus pneumoniae D39

46.905

100

0.472
  cinA Streptococcus mutans UA159

44.686

99.281

0.444
  cinA Streptococcus suis isolate S10

40.204

94.245

0.379

Multiple sequence alignment