Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | HB739_RS14650 | Genome accession | NZ_CP050326 |
| Coordinates | 3131271..3131867 (+) | Length | 198 a.a. |
| NCBI ID | WP_023087605.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain DVT423 | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 3126271..3136867
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HB739_RS14625 (HB739_14670) | - | 3127178..3127555 (+) | 378 | WP_003083354.1 | hypothetical protein | - |
| HB739_RS14635 (HB739_14680) | - | 3127809..3128675 (-) | 867 | WP_003120462.1 | ABC transporter substrate-binding protein | - |
| HB739_RS14640 (HB739_14685) | dnaX | 3128712..3130820 (+) | 2109 | WP_058165838.1 | DNA polymerase III subunit gamma/tau | - |
| HB739_RS14645 (HB739_14690) | - | 3130866..3131192 (+) | 327 | WP_003087236.1 | YbaB/EbfC family nucleoid-associated protein | - |
| HB739_RS14650 (HB739_14695) | recR | 3131271..3131867 (+) | 597 | WP_023087605.1 | recombination mediator RecR | Machinery gene |
| HB739_RS14655 (HB739_14700) | - | 3131990..3133138 (+) | 1149 | WP_003103930.1 | acyl-CoA dehydrogenase family protein | - |
| HB739_RS14660 (HB739_14705) | - | 3133151..3133690 (-) | 540 | WP_019682285.1 | CbrC family protein | - |
| HB739_RS14665 (HB739_14710) | - | 3133764..3134651 (-) | 888 | WP_003103932.1 | SDR family oxidoreductase | - |
| HB739_RS14670 (HB739_14715) | - | 3134648..3136231 (-) | 1584 | WP_003121915.1 | NAD(P)/FAD-dependent oxidoreductase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21185.48 Da Isoelectric Point: 6.0063
>NTDB_id=378586 HB739_RS14650 WP_023087605.1 3131271..3131867(+) (recR) [Pseudomonas aeruginosa strain DVT423]
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALIAAMEGVGHCRQCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALIAAMEGVGHCRQCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
Nucleotide
Download Length: 597 bp
>NTDB_id=378586 HB739_RS14650 WP_023087605.1 3131271..3131867(+) (recR) [Pseudomonas aeruginosa strain DVT423]
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGATCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCAGTGCCGTACCCTCAGCGAGGAGGAGTTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCGCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTCGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGCGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGATCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCAGTGCCGTACCCTCAGCGAGGAGGAGTTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCGCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTCGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGCGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.241 |
100 |
0.485 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
48.469 |
98.99 |
0.48 |