Detailed information NTG0371206

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: G4V50_RS03260
• Genome accession: NZ_CP048899
• Coordinates: 636412..637656 (+)
• Length: 414 a.a.
• NCBI ID: WP_010357951.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain SRRSH214
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 631412..642656

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G4V50_RS03235	-	631913..633373 (-)	1461	WP_010360128.1	site-specific DNA-methyltransferase	-
G4V50_RS03240	-	633579..634127 (-)	549	WP_050170923.1	site-specific DNA-methyltransferase	-
G4V50_RS03245	truB	634345..635265 (-)	921	WP_010357946.1	tRNA pseudouridine(55) synthase TruB	-
G4V50_RS03250	-	635323..635847 (-)	525	WP_003688872.1	hypothetical protein	-
G4V50_RS03255	rbfA	635858..636229 (-)	372	WP_003692998.1	30S ribosome-binding factor RbfA	-
G4V50_RS03260	clpX	636412..637656 (+)	1245	WP_010357951.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
G4V50_RS03265	-	637763..638956 (-)	1194	WP_003688867.1	aspartate aminotransferase family protein	-
G4V50_RS03270	-	639362..639862 (+)	501	WP_010357954.1	hypothetical protein	-
G4V50_RS03275	-	639947..640501 (+)	555	WP_003688863.1	hypothetical protein	-
G4V50_RS03280	-	640515..640715 (+)	201	WP_003688861.1	hypothetical protein	-
G4V50_RS03285	-	640846..640952 (+)	107	Protein_651	IS5/IS1182 family transposase	-
G4V50_RS03290	-	641066..642454 (-)	1389	WP_003697161.1	DEAD/DEAH box helicase	-

Sequence

Protein

• Length: 414 a.a.
• Molecular weight: 44804.21 Da
• Isoelectric Point: 4.9875

>NTDB_id=371206 G4V50_RS03260 WP_010357951.1 636412..637656(+) (clpX) [Neisseria gonorrhoeae strain SRRSH214]
MSNENRTCSFCGKSKSHAKHLIEGKNAYICDECVANCLEILYEGDNGGTPPENAGGEPEESGKLPTPAEIVANLDDYVIG
QGQAKKALAVAVYNHYKRLRHPKADGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
IITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDT
ANILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENAGITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDA
LINILTEPKNALVKQYQALFGIENVGLEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLQGLKKVVVGKA
VIEEGREPELVFES

Nucleotide

• Length: 1245 bp

>NTDB_id=371206 G4V50_RS03260 WP_010357951.1 636412..637656(+) (clpX) [Neisseria gonorrhoeae strain SRRSH214]
ATGTCCAACGAAAACCGTACCTGTTCCTTTTGCGGAAAATCCAAATCACACGCCAAACACCTGATTGAGGGCAAAAACGC
CTATATCTGCGACGAATGCGTCGCAAACTGCCTCGAAATATTGTACGAAGGCGACAACGGCGGCACGCCTCCGGAAAATG
CCGGAGGGGAGCCGGAAGAATCCGGCAAACTGCCCACGCCCGCCGAAATCGTTGCCAACCTCGACGATTATGTCATCGGG
CAGGGGCAGGCGAAAAAGGCGCTGGCGGTTGCGGTTTACAACCATTACAAACGCCTGCGCCACCCGAAAGCCGACGGCGG
TGTCGAATTGTCGAAATCCAACATCCTGCTTATCGGCCCGACCGGATCGGGTAAAACGCTGTTGGCGCAATCTTTGGCAC
GCAAACTGGACGTGCCGTTCGTGATGGCGGATGCGACCACGCTGACCGAAGCCGGCTATGTCGGCGAAGATGTCGAACAA
ATCATTACCAAACTGTTGGGCAAATGCGATTTCGATGTCGAAAAAGCCCAGCACGGCATTGTCTATATTGACGAAATTGA
CAAAATTTCGCGTAAAAGCGACAACCCGTCCATCACGCGCGACGTGTCCGGCGAAGGCGTGCAGCAAGCCTTGCTGAAAC
TGATTGAAGGTACGGTGGCAAGCGTTCCGCCCCAAGGCGGACGCAAGCATCCGAATCAGGAATTTATCAACGTTGATACC
GCCAACATCCTGTTTATCTGCGGCGGCGCGTTTGCAGGCTTGGAAAAAGTGATTCGCCAGCGCACCGAGAAAGGTGGTAT
CGGTTTCGGCGCGTCCGTTCACAGCAAGGACGAAAATGCCGGCATTACCAAGCTGTTCGGCATCGTCGAACCGGAAGATT
TAATCAAATTCGGCCTGATTCCGGAATTAATCGGACGTTTGCCCGTGATTGCAACTTTAGAAGAACTGGATGAGGACGCG
CTGATTAATATTTTAACCGAGCCGAAAAACGCTTTGGTCAAGCAGTATCAAGCCTTGTTCGGCATAGAAAACGTCGGGTT
GGAATTTGAAGAAGGCGCATTGCGTTCCATCGCGCGGCAGGCAATGGAACGCAAAACCGGCGCGCGCGGCCTGCGTTCCA
TCGTCGAACGCTGCCTGCTCGATACGATGTACCGCCTGCCCGATTTGCAAGGCTTGAAAAAAGTGGTGGTCGGCAAGGCA
GTCATCGAAGAGGGCAGGGAACCGGAATTGGTGTTCGAGTCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (112-310)

• ClpX C4-type zinc finger (zf-C4_ClpX) (7-42)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (316-387)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	55.797	100	0.558
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.964	99.758	0.548