Detailed information NTG0370894

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: C8250_RS17185
• Genome accession: NZ_CP048835
• Coordinates: 3801142..3801747 (-)
• Length: 201 a.a.
• NCBI ID: WP_164295743.1
• Uniprot ID: A0ABW8CCW3
• Organism: Streptomyces sp. So13.3
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3796142..3806747

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C8250_RS17165 (C8250_017185)	-	3797043..3797969 (+)	927	WP_138357758.1	hypothetical protein	-
C8250_RS17170 (C8250_017190)	-	3798059..3798856 (+)	798	WP_138357759.1	hypothetical protein	-
C8250_RS17175 (C8250_017195)	clpX	3798939..3800222 (-)	1284	WP_138357760.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
C8250_RS17180 (C8250_017200)	clpP	3800397..3801035 (-)	639	WP_138357777.1	ATP-dependent Clp protease proteolytic subunit	Regulator
C8250_RS17185 (C8250_017205)	clpP	3801142..3801747 (-)	606	WP_164295743.1	ATP-dependent Clp protease proteolytic subunit	Regulator
C8250_RS17190 (C8250_017210)	tig	3802009..3803418 (-)	1410	WP_138357762.1	trigger factor	-
C8250_RS17205 (C8250_017225)	-	3803988..3805133 (-)	1146	WP_138357763.1	site-specific integrase	-
C8250_RS17210 (C8250_017230)	-	3805133..3805342 (-)	210	WP_138357764.1	helix-turn-helix domain-containing protein	-
C8250_RS17215 (C8250_017235)	repSA	3805336..3806721 (-)	1386	WP_138357765.1	replication initiator protein RepSA	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 21164.12 Da
• Isoelectric Point: 4.7540

>NTDB_id=370894 C8250_RS17185 WP_164295743.1 3801142..3801747(-) (clpP) [Streptomyces sp. So13.3]
MPSAAGEPTIGGLGDQVYNRLLNERIIFLGQAVDDDIANKITAQLLLLAADPDKDIYLYINSPGGSVTAGMAIYDTMQFI
KNDVVTIAMGLAASMGQFLLTAGTPGKRFALPNTRILMHQPSAGLGGSATDIKIQAEQLLHTKRRMAELIAQHSGQSVEQ
ITKDSDRDRWFSAEEATAYGLLDGVMLTASGVPGGGGTGAV

Nucleotide

• Length: 606 bp

>NTDB_id=370894 C8250_RS17185 WP_164295743.1 3801142..3801747(-) (clpP) [Streptomyces sp. So13.3]
ATGCCTTCCGCCGCCGGCGAGCCGACCATCGGTGGACTCGGCGACCAGGTCTACAACCGACTGCTCAACGAGCGGATCAT
CTTCCTCGGCCAGGCGGTCGACGACGATATCGCCAACAAGATCACCGCGCAGCTGCTCCTTCTCGCCGCTGACCCGGACA
AGGACATTTACCTCTACATCAACTCGCCCGGCGGCTCCGTGACGGCCGGCATGGCGATCTACGACACGATGCAGTTCATC
AAGAACGACGTCGTGACGATCGCCATGGGCCTCGCCGCCTCGATGGGCCAGTTCCTGCTCACCGCGGGCACGCCCGGCAA
GCGCTTCGCGCTGCCGAACACCCGGATCCTGATGCACCAGCCCTCCGCGGGTCTGGGTGGCTCCGCCACCGACATCAAGA
TCCAGGCCGAGCAGCTGCTGCACACCAAGCGGCGGATGGCCGAGCTCATCGCGCAGCACAGCGGCCAGAGCGTCGAGCAG
ATCACCAAGGACTCCGACCGCGACCGCTGGTTCTCGGCCGAGGAGGCCACCGCCTACGGCCTGCTGGACGGGGTCATGCT
CACCGCCTCCGGCGTTCCGGGCGGTGGCGGCACCGGGGCTGTCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (15-186)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	53.476	93.035	0.498
clpP	Lactococcus lactis subsp. cremoris KW2	51.852	94.03	0.488
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	51.872	93.035	0.483
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	51.323	94.03	0.483
clpP	Streptococcus pyogenes JRS4	50.794	94.03	0.478
clpP	Streptococcus pyogenes MGAS315	50.794	94.03	0.478
clpP	Streptococcus mutans UA159	49.735	94.03	0.468
clpP	Streptococcus pneumoniae Rx1	48.187	96.02	0.463
clpP	Streptococcus pneumoniae D39	48.187	96.02	0.463
clpP	Streptococcus pneumoniae R6	48.187	96.02	0.463
clpP	Streptococcus pneumoniae TIGR4	48.187	96.02	0.463
clpP	Streptococcus thermophilus LMG 18311	48.677	94.03	0.458
clpP	Streptococcus thermophilus LMD-9	48.677	94.03	0.458