Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | GZS09_RS05470 | Genome accession | NZ_CP048359 |
| Coordinates | 1132194..1132709 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130210.1 | Uniprot ID | B6I678 |
| Organism | Escherichia coli strain 53 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1127194..1137709
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZS09_RS05425 (GZS09_05425) | csrA | 1127781..1127966 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| GZS09_RS05455 (GZS09_05455) | yqaB | 1129424..1129990 (+) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| GZS09_RS05460 (GZS09_05460) | yqaA | 1129987..1130415 (+) | 429 | WP_001287457.1 | YqaA family protein | - |
| GZS09_RS05465 (GZS09_05465) | gshA | 1130488..1132044 (+) | 1557 | WP_000611802.1 | glutamate--cysteine ligase | - |
| GZS09_RS05470 (GZS09_05470) | luxS | 1132194..1132709 (+) | 516 | WP_001130210.1 | S-ribosylhomocysteine lyase | Regulator |
| GZS09_RS05475 (GZS09_05475) | emrB | 1132773..1134311 (-) | 1539 | WP_001295176.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| GZS09_RS05480 (GZS09_05480) | emrA | 1134328..1135500 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| GZS09_RS05485 (GZS09_05485) | emrR | 1135627..1136157 (-) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| GZS09_RS05495 (GZS09_05495) | ygaH | 1136248..1136583 (-) | 336 | WP_000119763.1 | L-valine transporter subunit YgaH | - |
| GZS09_RS05500 (GZS09_05500) | ygaZ | 1136573..1137310 (-) | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19417.13 Da Isoelectric Point: 4.7556
>NTDB_id=368178 GZS09_RS05470 WP_001130210.1 1132194..1132709(+) (luxS) [Escherichia coli strain 53]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPEEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPEEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=368178 GZS09_RS05470 WP_001130210.1 1132194..1132709(+) (luxS) [Escherichia coli strain 53]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCG
CTGCCGGAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCG
CTGCCGGAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |