Detailed information NTG0367244

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: FDP16_RS10315
• Genome accession: NZ_CP040798
• Coordinates: 2087093..2087530 (-)
• Length: 145 a.a.
• NCBI ID: WP_176799580.1
• Uniprot ID: -
• Organism: Streptococcus sanguinis strain CGMH058
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2082093..2092530

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FDP16_RS10290 (FDP16_10750)	-	2082794..2083432 (-)	639	WP_176799576.1	type II CAAX prenyl endopeptidase Rce1 family protein	-
FDP16_RS10295 (FDP16_10755)	-	2083550..2084299 (-)	750	WP_176799577.1	CPBP family intramembrane glutamic endopeptidase	-
FDP16_RS10300 (FDP16_10760)	-	2084446..2085636 (-)	1191	WP_176799578.1	acetate kinase	-
FDP16_RS10305 (FDP16_10765)	comYH	2085673..2086638 (-)	966	WP_124765830.1	class I SAM-dependent methyltransferase	Machinery gene
FDP16_RS10310 (FDP16_10770)	comGG	2086720..2087112 (-)	393	WP_176799579.1	competence type IV pilus minor pilin ComGG	-
FDP16_RS10315 (FDP16_10775)	comGF/cglF	2087093..2087530 (-)	438	WP_176799580.1	competence type IV pilus minor pilin ComGF	Machinery gene
FDP16_RS10320 (FDP16_10780)	comGE/cglE	2087514..2087807 (-)	294	WP_176799581.1	competence type IV pilus minor pilin ComGE	Machinery gene
FDP16_RS10325 (FDP16_10785)	comYD	2087773..2088207 (-)	435	WP_176799582.1	competence type IV pilus minor pilin ComGD	Machinery gene
FDP16_RS10330 (FDP16_10790)	comYC	2088167..2088484 (-)	318	WP_002896769.1	competence type IV pilus major pilin ComGC	Machinery gene
FDP16_RS10335 (FDP16_10795)	comYB	2088484..2089518 (-)	1035	WP_256254487.1	competence type IV pilus assembly protein ComGB	Machinery gene
FDP16_RS10340 (FDP16_10800)	comYA	2089448..2090389 (-)	942	WP_002896773.1	competence type IV pilus ATPase ComGA	Machinery gene
FDP16_RS10345 (FDP16_10805)	-	2090519..2090899 (-)	381	WP_176799584.1	DUF1033 family protein	-
FDP16_RS10350 (FDP16_10810)	-	2091038..2092099 (-)	1062	WP_176799585.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16827.08 Da
• Isoelectric Point: 5.3227

>NTDB_id=367244 FDP16_RS10315 WP_176799580.1 2087093..2087530(-) (comGF/cglF) [Streptococcus sanguinis strain CGMH058]
MSKNLKVKAFTLLETLVALLVLSGGILVFQAMTQLLSSELHQQENNQQQEWLLFADQLETELSRSQFDKVEDNKIYIRQD
GRDLALGKSKGDDFRKTDKSGRGYQPMIYGLEAADVRQESKLVHLHFRFEKGLEREFVYRVEEES

Nucleotide

• Length: 438 bp

>NTDB_id=367244 FDP16_RS10315 WP_176799580.1 2087093..2087530(-) (comGF/cglF) [Streptococcus sanguinis strain CGMH058]
GTGTCCAAAAACCTTAAAGTCAAGGCTTTTACGCTCTTGGAGACTTTAGTAGCCTTGCTTGTTCTCAGTGGTGGCATACT
GGTCTTTCAGGCCATGACCCAGCTCTTATCTTCAGAACTGCATCAGCAGGAGAATAATCAGCAGCAAGAGTGGCTTTTGT
TTGCCGACCAACTGGAGACGGAGCTTTCGCGAAGTCAATTTGATAAGGTTGAAGACAATAAAATCTACATCAGACAAGAT
GGCAGAGACCTGGCCTTGGGGAAATCCAAGGGAGATGATTTCCGTAAAACAGATAAGAGCGGTCGCGGCTACCAGCCCAT
GATTTATGGTTTAGAAGCAGCTGACGTCCGTCAGGAAAGTAAGCTTGTCCATCTTCATTTTCGCTTTGAAAAAGGTTTAG
AGAGGGAGTTCGTCTATCGTGTGGAAGAAGAAAGTTGA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	64.336	98.621	0.634
comGF/cglF	Streptococcus pneumoniae D39	64.336	98.621	0.634
comGF/cglF	Streptococcus pneumoniae R6	64.336	98.621	0.634
comGF/cglF	Streptococcus pneumoniae TIGR4	64.336	98.621	0.634
comGF/cglF	Streptococcus mitis NCTC 12261	62.937	98.621	0.621
comGF/cglF	Streptococcus mitis SK321	62.937	98.621	0.621
comYF	Streptococcus mutans UA159	46.429	96.552	0.448
comYF	Streptococcus mutans UA140	45.714	96.552	0.441
comGF	Lactococcus lactis subsp. cremoris KW2	41.912	93.793	0.393