Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   FDP16_RS02100 Genome accession   NZ_CP040798
Coordinates   415629..417605 (+) Length   658 a.a.
NCBI ID   WP_176798397.1    Uniprot ID   A0A7H8V120
Organism   Streptococcus sanguinis strain CGMH058     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 410629..422605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FDP16_RS02090 (FDP16_02175) amiA 411285..413240 (+) 1956 WP_176798395.1 peptide ABC transporter substrate-binding protein Regulator
  FDP16_RS02095 (FDP16_02180) amiA3 413432..415402 (+) 1971 WP_176798396.1 peptide ABC transporter substrate-binding protein Regulator
  FDP16_RS02100 (FDP16_02185) amiA3 415629..417605 (+) 1977 WP_176798397.1 peptide ABC transporter substrate-binding protein Regulator
  FDP16_RS02105 (FDP16_02190) amiC 417671..419167 (+) 1497 WP_176798398.1 ABC transporter permease Regulator
  FDP16_RS02110 (FDP16_02195) amiD 419167..420093 (+) 927 WP_176798399.1 oligopeptide ABC transporter permease OppC Regulator
  FDP16_RS02115 (FDP16_02200) amiE 420102..421169 (+) 1068 WP_176798400.1 ABC transporter ATP-binding protein Regulator
  FDP16_RS02120 (FDP16_02205) amiF 421180..422094 (+) 915 WP_176798401.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 72522.44 Da        Isoelectric Point: 4.6794

>NTDB_id=367202 FDP16_RS02100 WP_176798397.1 415629..417605(+) (amiA3) [Streptococcus sanguinis strain CGMH058]
MKKSKVLALAGVSLLSVGLLVACSSSSKGNSTSTSYNYVYTADPETLDYVTSGKASTADFVTNGVDGLLENDQYGNFVPS
IAESWTVSKDGLTYTYKIRKDAKWYTSEGEEYGDVTAQDFVTGLKHAADKKSEALYLVQQSVKGLDDYVNGKTTDFSTVG
VKAVDDHTLQYTLNQPEPYWNSKTTSQVLWPINAEFLKKQGDKFGQSTDPTSILYNGPFLMKSITAKSAVEYQKNENYWD
KENVHIDTIKLSYFDGQDQDALARNFKDGAFTLARLYPTSSNFAGIEKDFKDNIFFTSPSAGVAVMGVNIDRQSYNHTSK
TTDAQKSSTKKAILNKDFRQALSFAIDRTSYSAQINGEEGAPYAVRNTYVPPSFVQVGEKSFGDVVEEKVAALGEEWKGI
QLEDGQDGLFNAEKAKAEFAKAKAALQAEGVEFPIHLDLPVAQTSKPMVNRAQSLKQSVEKTLGAENVVVDIQQMSEDDL
YNITYYAPNAAGEDWDISTAVGWNPDYQDPSTYLDILKTTSTETTKTYLGFEGTDNAAAKQVGLDEFDRLVNEAGKETSD
IATRYEKYAAAQAWLTDNSLVVPLMANPGAAPFISRVEPFSGAYGQTGSKTGSTYFKRIKVQNEVVTKKDYEAARKKWLE
EKEESNAKAQKDLESHVE

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=367202 FDP16_RS02100 WP_176798397.1 415629..417605(+) (amiA3) [Streptococcus sanguinis strain CGMH058]
ATGAAAAAAAGCAAAGTATTGGCTTTAGCTGGAGTTAGTCTTCTTTCAGTAGGTCTTTTGGTTGCTTGTTCTAGTTCATC
AAAAGGGAATAGCACTTCAACATCTTACAACTATGTCTATACTGCTGATCCAGAAACATTGGATTATGTGACATCTGGTA
AAGCTTCGACAGCTGATTTTGTGACAAATGGCGTGGATGGTTTGTTGGAAAATGACCAATATGGTAATTTTGTACCATCA
ATAGCAGAGTCTTGGACTGTCTCTAAAGACGGCTTGACTTACACCTACAAAATCCGTAAAGATGCCAAATGGTATACTTC
AGAAGGTGAAGAATATGGCGATGTGACAGCTCAGGACTTTGTGACTGGTCTTAAGCATGCTGCTGATAAAAAATCTGAAG
CCCTTTATCTTGTGCAACAATCTGTAAAAGGTTTGGATGACTATGTAAATGGTAAAACAACTGATTTCTCTACTGTTGGA
GTTAAAGCAGTTGACGATCATACCCTCCAATATACTCTTAACCAACCTGAGCCATATTGGAATTCAAAAACAACTTCACA
AGTCCTGTGGCCAATCAATGCAGAATTCCTTAAGAAACAAGGGGATAAATTCGGTCAATCTACTGATCCAACTTCTATCC
TTTACAATGGACCATTCTTGATGAAATCTATCACAGCTAAATCTGCTGTAGAGTACCAAAAGAATGAAAACTACTGGGAC
AAGGAAAATGTCCACATCGATACAATCAAGTTGTCTTACTTTGATGGGCAAGACCAAGATGCTCTTGCTCGTAACTTCAA
AGATGGTGCTTTTACATTAGCTCGTCTCTACCCTACAAGCTCAAACTTTGCTGGTATCGAAAAAGATTTCAAGGATAACA
TTTTCTTCACATCACCAAGTGCCGGTGTAGCCGTTATGGGTGTCAATATCGACCGCCAAAGCTACAACCATACAAGCAAA
ACAACAGATGCTCAAAAGTCTTCTACTAAGAAAGCCATTCTTAACAAAGACTTCCGTCAAGCCTTGAGCTTTGCTATCGA
CCGCACATCATATTCAGCACAAATCAATGGTGAAGAGGGTGCTCCTTATGCTGTCCGTAACACTTATGTGCCACCTTCAT
TTGTTCAAGTCGGTGAAAAATCTTTTGGTGACGTTGTAGAAGAAAAAGTTGCAGCCTTAGGTGAGGAGTGGAAAGGTATT
CAACTTGAGGACGGTCAAGATGGTCTCTTTAATGCTGAGAAGGCAAAAGCAGAGTTTGCAAAAGCAAAAGCAGCCCTACA
AGCTGAGGGAGTGGAATTCCCAATCCATCTGGATCTGCCAGTTGCTCAGACTTCTAAGCCAATGGTTAACCGTGCGCAAT
CACTTAAGCAATCTGTTGAAAAGACTTTGGGAGCTGAGAATGTTGTTGTAGATATCCAACAAATGTCAGAAGATGATCTT
TATAACATTACTTACTATGCACCAAATGCTGCTGGCGAAGACTGGGATATCTCAACAGCTGTTGGTTGGAACCCTGACTA
TCAAGATCCATCAACTTATTTGGATATTTTGAAAACTACATCAACTGAAACTACAAAAACTTACCTTGGTTTTGAGGGAA
CAGATAATGCTGCCGCTAAGCAAGTTGGTTTAGATGAATTTGACCGCTTGGTAAATGAGGCTGGCAAAGAAACTTCAGAT
ATTGCCACTCGCTACGAAAAATATGCAGCAGCTCAGGCTTGGTTGACAGACAACTCTCTTGTTGTTCCATTGATGGCAAA
TCCTGGTGCAGCACCATTTATCTCACGTGTCGAGCCATTCTCAGGTGCTTATGGCCAAACTGGTAGTAAGACAGGTTCTA
CTTACTTCAAACGTATTAAAGTTCAAAATGAAGTAGTAACGAAGAAAGACTACGAAGCAGCTCGTAAGAAATGGCTGGAA
GAAAAAGAAGAGTCAAATGCGAAAGCACAAAAAGATCTCGAAAGTCATGTAGAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8V120

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

65.554

100

0.657
  amiA3 Streptococcus thermophilus LMG 18311

65.099

100

0.652
  amiA Streptococcus salivarius strain HSISS4

64.59

100

0.646

Multiple sequence alignment