Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiC   Type   Regulator
Locus tag   FDP16_RS02105 Genome accession   NZ_CP040798
Coordinates   417671..419167 (+) Length   498 a.a.
NCBI ID   WP_176798398.1    Uniprot ID   A0A7H8UYG6
Organism   Streptococcus sanguinis strain CGMH058     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 412671..424167
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FDP16_RS02095 (FDP16_02180) amiA3 413432..415402 (+) 1971 WP_176798396.1 peptide ABC transporter substrate-binding protein Regulator
  FDP16_RS02100 (FDP16_02185) amiA3 415629..417605 (+) 1977 WP_176798397.1 peptide ABC transporter substrate-binding protein Regulator
  FDP16_RS02105 (FDP16_02190) amiC 417671..419167 (+) 1497 WP_176798398.1 ABC transporter permease Regulator
  FDP16_RS02110 (FDP16_02195) amiD 419167..420093 (+) 927 WP_176798399.1 oligopeptide ABC transporter permease OppC Regulator
  FDP16_RS02115 (FDP16_02200) amiE 420102..421169 (+) 1068 WP_176798400.1 ABC transporter ATP-binding protein Regulator
  FDP16_RS02120 (FDP16_02205) amiF 421180..422094 (+) 915 WP_176798401.1 ATP-binding cassette domain-containing protein Regulator

Sequence


Protein


Download         Length: 498 a.a.        Molecular weight: 55897.78 Da        Isoelectric Point: 9.7295

>NTDB_id=367203 FDP16_RS02105 WP_176798398.1 417671..419167(+) (amiC) [Streptococcus sanguinis strain CGMH058]
MKKYIFMRILRSLVSIFLVTTLTYTIIYTMVPRRLIFKQDPNYNKIATNKDKKANYENTIFERMGYIDYYDTKELQEKAS
KEDSSVTTEATEANKKIYQKYIDKLGNGWKLQKFPLSGEFYAVREVPVYERVFEFYANLIQIDHPNVIQDEENPNLERYI
RIENDPAIGWSVVGSGTRHKYLLYFNGQFPFVHQNFITFNLGYSYPTYANIPVLQVITQGQGQTKSSEVQFPTGKKTSSV
NIYSRTYKTPSKADSQDIAKFGKGDAYTETQSNYQNPSMIASSAIIGLIGVALSYLIAIPLGSYMARLKNTWFDSISTAG
LTFMMSLPTIALVYIVRLAGSAVGLPDSFPILGAGDWRSYVLPAVILGLLSAPWTAVWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSSIPASIVGVIAGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCLSIFALLLGD
ILMTVLDPRIKLTSKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=367203 FDP16_RS02105 WP_176798398.1 417671..419167(+) (amiC) [Streptococcus sanguinis strain CGMH058]
ATGAAAAAATATATTTTTATGCGTATTTTACGCTCACTTGTGTCGATTTTCTTGGTAACGACCTTGACCTATACCATTAT
CTATACTATGGTGCCAAGAAGGTTGATTTTCAAGCAGGATCCTAACTATAATAAAATAGCGACCAATAAAGATAAAAAAG
CTAATTATGAAAACACCATCTTTGAGCGGATGGGTTACATTGACTATTATGATACTAAGGAACTGCAGGAGAAGGCCAGC
AAGGAAGATTCCTCTGTTACAACAGAAGCTACAGAAGCAAACAAGAAGATTTATCAGAAGTATATTGATAAACTTGGCAA
TGGCTGGAAATTGCAGAAATTCCCACTGAGCGGAGAATTCTATGCTGTGCGCGAAGTGCCTGTTTATGAGCGTGTCTTTG
AGTTCTATGCTAATTTGATTCAAATTGACCATCCAAATGTTATCCAAGATGAGGAAAACCCAAACCTTGAGCGCTATATC
CGAATCGAAAATGACCCTGCTATTGGTTGGTCTGTCGTCGGATCTGGAACTCGTCATAAATACCTTCTATATTTCAATGG
TCAGTTCCCATTTGTTCACCAGAACTTTATTACCTTTAATTTAGGTTATTCTTATCCGACCTATGCTAATATCCCTGTTC
TGCAGGTTATTACGCAAGGACAAGGACAAACGAAGTCTTCTGAAGTTCAATTTCCAACAGGCAAAAAGACATCGTCTGTT
AACATTTACTCTCGTACCTATAAGACGCCAAGCAAAGCCGATTCACAGGACATTGCTAAGTTTGGTAAGGGAGATGCCTA
TACAGAGACTCAAAGCAACTATCAAAATCCGTCCATGATTGCCAGCTCAGCCATTATTGGTTTGATTGGTGTGGCCCTGT
CTTATCTGATCGCTATTCCGCTTGGGTCCTACATGGCTCGACTTAAGAATACATGGTTTGACAGTATTTCTACAGCTGGC
TTGACCTTTATGATGTCACTGCCAACCATCGCCTTGGTCTACATTGTCCGTTTGGCGGGGTCTGCCGTTGGTCTTCCAGA
TTCCTTCCCAATCTTGGGTGCAGGAGATTGGCGTTCTTATGTCCTTCCGGCTGTTATTCTAGGGCTTTTGAGTGCTCCTT
GGACGGCGGTTTGGATACGCCGGTATATGATTGACCTTCAGTCTCAAGACTTTGTTCGTTTTGCGCGTGCCAAAGGTCTT
TCTGAAAAAGAAATTTCTAACAAACATATTTTCAAAAATGCTATGGTACCATTGGTATCTAGTATTCCAGCTTCTATCGT
TGGTGTCATTGCAGGTGCTACCCTGACGGAAACAGTCTTTGCCTTTCCGGGTATGGGGAAAATGTTGATTGACTCCGTTA
AAGCATCTAATAACTCCATGGTAGTCGGTCTCGTATTTATTTTTACATGTCTTTCAATCTTTGCCCTCTTATTAGGTGAT
ATCTTGATGACAGTACTTGACCCACGTATTAAATTAACATCTAAAGGAGGTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7H8UYG6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

76.908

100

0.769

  amiC Streptococcus thermophilus LMD-9

76.707

100

0.767

  amiC Streptococcus thermophilus LMG 18311

76.707

100

0.767


Multiple sequence alignment