Detailed information NTG0367206

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FDP16_RS02120
• Genome accession: NZ_CP040798
• Coordinates: 421180..422094 (+)
• Length: 304 a.a.
• NCBI ID: WP_176798401.1
• Uniprot ID: A0A7H8UYH3
• Organism: Streptococcus sanguinis strain CGMH058
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 416180..427094

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FDP16_RS02105 (FDP16_02190)	amiC	417671..419167 (+)	1497	WP_176798398.1	ABC transporter permease	Regulator
FDP16_RS02110 (FDP16_02195)	amiD	419167..420093 (+)	927	WP_176798399.1	oligopeptide ABC transporter permease OppC	Regulator
FDP16_RS02115 (FDP16_02200)	amiE	420102..421169 (+)	1068	WP_176798400.1	ABC transporter ATP-binding protein	Regulator
FDP16_RS02120 (FDP16_02205)	amiF	421180..422094 (+)	915	WP_176798401.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 304 a.a.
• Molecular weight: 34398.38 Da
• Isoelectric Point: 6.1158

>NTDB_id=367206 FDP16_RS02120 WP_176798401.1 421180..422094(+) (amiF) [Streptococcus sanguinis strain CGMH058]
MTEKLVEIKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSAGDIFYEGKKINGKKSKA
EEADLIRKIQMIFQDPAASLNERATVDYILSEGLYNYHLFDNEEDRQRKVKDIINEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMQPDFVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
HPVHPYTQSLLSAVPIPDPILERKKVLKVYDPEQHDYSVDKPEMSEIRPGHYVWANKAELEKYK

Nucleotide

• Length: 915 bp

>NTDB_id=367206 FDP16_RS02120 WP_176798401.1 421180..422094(+) (amiF) [Streptococcus sanguinis strain CGMH058]
ATGACTGAAAAATTAGTTGAAATTAAAGATTTAGAAATTTCCTTCGGTGAAGGAAGTAAGAAATTTGTAGCAGTAAAAAA
TGCGAATTTCTTCATCAATAAGGGGGAAACTTTCTCTCTAGTAGGAGAATCAGGTTCTGGTAAAACTACTATCGGTCGAG
CTATCATCGGTCTCAATGATACCAGTGCAGGCGATATCTTCTATGAAGGTAAAAAGATTAACGGAAAAAAATCGAAAGCT
GAAGAAGCGGATTTGATTCGCAAGATTCAGATGATTTTTCAAGACCCAGCTGCCAGCCTAAATGAGCGTGCGACTGTTGA
TTACATCCTCTCTGAGGGTCTCTACAATTACCATTTATTTGATAATGAAGAAGATCGTCAAAGAAAAGTCAAAGATATCA
TCAATGAAGTCGGCTTGTTGGCTGAGCATTTAACTCGCTATCCTCATGAATTCTCTGGTGGACAGCGTCAGCGGATTGGG
ATTGCTCGCGCTTTGGTCATGCAACCAGATTTCGTAATTGCAGATGAGCCAATCTCCGCCTTGGACGTGTCTGTTCGGGC
TCAGGTTCTGAATCTATTGAAAAAATTCCAAAAAGAATTAGGCTTGACATATCTCTTTATTGCCCATGACCTTTCGGTAG
TTCGTTTCATTTCTGATCGTATCGCTGTTATTTATAAGGGTGTTATTGTAGAGGTTGCTGAGACAGAAGAATTGTTCAAT
CACCCTGTCCATCCCTACACCCAGTCCTTGCTCTCGGCTGTCCCAATCCCAGACCCAATCTTAGAGCGCAAGAAAGTGTT
GAAGGTCTATGACCCTGAACAGCACGATTATTCTGTTGATAAACCAGAAATGTCTGAGATTCGTCCAGGACATTATGTCT
GGGCTAATAAAGCTGAACTCGAAAAGTATAAATAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

3D structure

• AlphaFold DB: A0A7H8UYH3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus salivarius strain HSISS4	86.184	100	0.862
amiF	Streptococcus thermophilus LMG 18311	85.526	100	0.855
amiF	Streptococcus thermophilus LMD-9	85.197	100	0.852