Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   FD735_RS08500 Genome accession   NZ_CP040231
Coordinates   1644205..1645461 (-) Length   418 a.a.
NCBI ID   WP_139658965.1    Uniprot ID   A0A5B7Y7T7
Organism   Streptococcus sp. 1643     
Function   facilitate localization of RecA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1639205..1650461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FD735_RS08475 (FD735_08475) - 1639656..1640372 (-) 717 WP_000532894.1 YebC/PmpR family DNA-binding transcriptional regulator -
  FD735_RS08480 (FD735_08480) - 1640469..1641839 (-) 1371 WP_139658964.1 MATE family efflux transporter -
  FD735_RS08485 (FD735_08485) - 1641949..1642503 (+) 555 WP_000060284.1 GNAT family N-acetyltransferase -
  FD735_RS08490 (FD735_08490) - 1642635..1642829 (-) 195 WP_000415528.1 PspC domain-containing protein -
  FD735_RS08495 (FD735_08495) recA 1642999..1644150 (-) 1152 WP_084877348.1 recombinase RecA Machinery gene
  FD735_RS08500 (FD735_08500) cinA 1644205..1645461 (-) 1257 WP_139658965.1 competence/damage-inducible protein A Machinery gene
  FD735_RS08505 (FD735_08505) - 1645534..1646574 (-) 1041 WP_139658966.1 LCP family protein -
  FD735_RS08510 (FD735_08510) - 1646579..1647100 (-) 522 WP_139658967.1 GNAT family N-acetyltransferase -
  FD735_RS08515 (FD735_08515) tsaE 1647090..1647533 (-) 444 WP_139658968.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FD735_RS08520 (FD735_08520) comM 1647617..1648240 (-) 624 WP_125414027.1 hypothetical protein Regulator
  FD735_RS08525 (FD735_08525) ndk 1648375..1648794 (-) 420 WP_000438280.1 nucleoside-diphosphate kinase -

Sequence

Protein


Download         Length: 418 a.a.        Molecular weight: 45185.54 Da        Isoelectric Point: 4.9073

>NTDB_id=362667 FD735_RS08500 WP_139658965.1 1644205..1645461(-) (cinA) [Streptococcus sp. 1643]
MKAEIIAVGTEILTGQIVNTNAQFLSEKLAEIGVDVYFQTAVGDNEARLLSLLEIASQRSNLVILTGGLGPTEDDLTKQT
LAKFLGKNLVFDPQAQEKLDIFFAHRPDYARTPNNERQAQIVEGATPLPNETGLAVGGVSEVDGVTYVVLPGPPSELKPM
VLNQLLPKLMTGTKLYSRVLRFFGIGESQLVTILADLIDHQTDPTLAPYAKTGEVTLRLSTKAVSQEKADQALDILENQI
LSRQTFEGISLRDICYGYGEETSLASVVVEELKKRQKSITAAESLTAGLFQATLADFSGVSAIFNGGFVTYSLEEKSKML
DISEQELKEYGVVSEFTARKMAEQARIKTQSDYGVSLTGVAGPDSLEGHPAGTVFIGLAHAKGTEVIKANIAGRSRADVR
HIAVMHAFNLVRKALLSD

Nucleotide


Download         Length: 1257 bp        

>NTDB_id=362667 FD735_RS08500 WP_139658965.1 1644205..1645461(-) (cinA) [Streptococcus sp. 1643]
ATGAAAGCAGAAATTATTGCTGTCGGAACAGAAATTTTAACAGGGCAGATTGTCAATACCAATGCTCAGTTTTTATCAGA
GAAACTAGCCGAAATCGGGGTAGATGTCTACTTCCAAACAGCTGTTGGAGATAATGAAGCTCGTCTTTTGTCCTTGCTTG
AGATTGCGAGTCAACGTAGTAATCTTGTGATTTTGACAGGGGGCTTGGGACCAACTGAGGATGATTTGACCAAACAAACT
CTGGCAAAATTTTTAGGAAAAAATCTAGTGTTTGACCCTCAAGCACAAGAGAAACTGGATATTTTCTTTGCTCATAGACC
TGACTATGCTCGGACACCGAATAATGAGCGTCAAGCCCAAATTGTAGAAGGGGCGACTCCACTGCCAAATGAGACAGGTT
TAGCAGTAGGAGGGGTTTCGGAAGTGGATGGCGTGACCTACGTGGTCCTTCCAGGACCACCTAGTGAATTGAAACCTATG
GTCTTAAATCAACTCTTGCCCAAGCTGATGACAGGCACCAAGTTATACTCACGAGTGCTCCGTTTCTTTGGAATTGGGGA
GAGTCAGTTGGTGACCATTTTGGCGGATTTGATTGACCATCAAACCGATCCGACTTTGGCGCCGTATGCCAAGACGGGAG
AAGTGACCTTGCGCTTGTCTACAAAAGCAGTCAGTCAAGAAAAGGCTGATCAAGCGCTGGATATCTTAGAAAATCAAATC
TTGAGTCGCCAAACTTTCGAGGGAATTTCTTTACGAGACATCTGTTATGGATACGGGGAAGAAACCAGTCTAGCAAGTGT
CGTTGTAGAAGAGCTAAAGAAGAGACAGAAAAGCATTACTGCGGCAGAAAGCTTGACGGCAGGTCTCTTTCAAGCGACAT
TAGCAGACTTTTCGGGCGTTTCAGCCATCTTTAATGGCGGCTTTGTCACTTACAGCCTAGAAGAAAAGTCTAAGATGTTG
GATATTTCTGAGCAAGAGCTAAAAGAATACGGGGTCGTTTCTGAGTTTACGGCTCGAAAAATGGCAGAGCAGGCACGGAT
TAAGACTCAGTCTGACTACGGAGTTAGTTTGACGGGTGTGGCAGGGCCAGATAGCCTAGAGGGGCATCCAGCTGGTACAG
TTTTTATTGGACTGGCACATGCAAAAGGGACAGAGGTGATCAAGGCTAATATTGCAGGACGGAGTCGAGCAGATGTTCGA
CATATTGCAGTCATGCATGCCTTTAACCTAGTTCGCAAAGCTTTATTAAGTGACTAA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(177-243)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Competence-damaged protein (CinA)

(262-414)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5B7Y7T7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Streptococcus mitis SK321

90.191

100

0.902
  cinA Streptococcus mitis NCTC 12261

89.474

100

0.895
  cinA Streptococcus pneumoniae TIGR4

89.474

100

0.895
  cinA Streptococcus pneumoniae Rx1

89.474

100

0.895
  cinA Streptococcus pneumoniae R6

89.474

100

0.895
  cinA Streptococcus pneumoniae D39

89.234

100

0.892
  cinA Streptococcus mutans UA159

70.335

100

0.703
  cinA Streptococcus suis isolate S10

55.288

99.522

0.55
  cinA Bacillus subtilis subsp. subtilis str. 168

45.455

100

0.455

Multiple sequence alignment