Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   FD735_RS08520 Genome accession   NZ_CP040231
Coordinates   1647617..1648240 (-) Length   207 a.a.
NCBI ID   WP_125414027.1    Uniprot ID   A0A5B7Y832
Organism   Streptococcus sp. 1643     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1642617..1653240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FD735_RS08490 (FD735_08490) - 1642635..1642829 (-) 195 WP_000415528.1 PspC domain-containing protein -
  FD735_RS08495 (FD735_08495) recA 1642999..1644150 (-) 1152 WP_084877348.1 recombinase RecA Machinery gene
  FD735_RS08500 (FD735_08500) cinA 1644205..1645461 (-) 1257 WP_139658965.1 competence/damage-inducible protein A Machinery gene
  FD735_RS08505 (FD735_08505) - 1645534..1646574 (-) 1041 WP_139658966.1 LCP family protein -
  FD735_RS08510 (FD735_08510) - 1646579..1647100 (-) 522 WP_139658967.1 GNAT family N-acetyltransferase -
  FD735_RS08515 (FD735_08515) tsaE 1647090..1647533 (-) 444 WP_139658968.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FD735_RS08520 (FD735_08520) comM 1647617..1648240 (-) 624 WP_125414027.1 hypothetical protein Regulator
  FD735_RS08525 (FD735_08525) ndk 1648375..1648794 (-) 420 WP_000438280.1 nucleoside-diphosphate kinase -
  FD735_RS08530 (FD735_08530) rpoC 1648906..1652571 (-) 3666 WP_000228753.1 DNA-directed RNA polymerase subunit beta' -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23710.69 Da        Isoelectric Point: 9.2205

>NTDB_id=362668 FD735_RS08520 WP_125414027.1 1647617..1648240(-) (comM) [Streptococcus sp. 1643]
MVKSIRLLLLIAVIQISFSSCLLWKESFLSLKQTNAYFLILIVGISVLCAGINYFHTADQSRYSILHVQKKVSLVYCLLL
VVNLLATCLVLSESIQTTSKLQQELVDLFLPSFFFLLGVDLLIFLPFDKIFRDIENHLNKKKTVVISVLATMVFLRNPLV
ISSILLYISVGFLCARFLFPKCIQREISFYGHLIRDILFVFSIVVFF

Nucleotide


Download         Length: 624 bp        

>NTDB_id=362668 FD735_RS08520 WP_125414027.1 1647617..1648240(-) (comM) [Streptococcus sp. 1643]
ATGGTAAAATCAATTCGCCTATTGTTGTTGATTGCAGTCATCCAGATTAGTTTTAGTAGTTGCCTATTATGGAAAGAATC
CTTTTTATCTTTAAAACAGACCAATGCTTATTTTTTGATTTTGATAGTAGGAATTTCTGTTTTGTGCGCTGGGATAAATT
ATTTCCATACAGCAGACCAGTCTAGATATAGTATTTTGCATGTTCAAAAGAAAGTGAGTCTTGTTTATTGCCTCCTTTTA
GTAGTCAATCTTCTGGCAACCTGTCTGGTTCTCTCAGAAAGCATCCAGACCACTAGCAAATTGCAGCAGGAATTGGTTGA
CCTCTTTTTGCCCTCCTTTTTTTTCTTGCTAGGAGTAGATCTATTGATTTTCTTACCTTTTGATAAAATTTTTCGCGATA
TAGAAAATCACCTAAATAAAAAGAAAACAGTCGTCATTTCCGTTCTAGCTACGATGGTTTTCTTGAGGAATCCCTTAGTG
ATTTCCTCGATTCTCCTTTATATCAGTGTCGGTTTTCTATGTGCACGTTTCCTTTTTCCCAAATGTATCCAAAGGGAAAT
CTCCTTTTATGGACACCTGATTCGGGATATCCTGTTTGTTTTTTCAATAGTTGTATTCTTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5B7Y832

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

50.971

99.517

0.507
  comM Streptococcus pneumoniae R6

50.971

99.517

0.507
  comM Streptococcus pneumoniae TIGR4

50.971

99.517

0.507
  comM Streptococcus mitis NCTC 12261

41.117

95.169

0.391
  comM Streptococcus mitis SK321

41.117

95.169

0.391

Multiple sequence alignment