Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   E3S99_RS09970 Genome accession   NZ_CP047785
Coordinates   2000012..2000812 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain UP_1186     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1995012..2005812
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S99_RS09950 (E3S99_09950) - 1995158..1996105 (+) 948 Protein_1925 IS30 family transposase -
  E3S99_RS13940 (E3S99_09955) - 1996097..1996372 (-) 276 WP_072468794.1 site-specific DNA-methyltransferase -
  E3S99_RS09960 (E3S99_09960) rlmH 1996637..1997116 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  E3S99_RS09965 (E3S99_09965) adsA 1997484..1999784 (-) 2301 WP_160199791.1 LPXTG-anchored adenosine synthase AdsA -
  E3S99_RS09970 (E3S99_09970) vicX 2000012..2000812 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  E3S99_RS09975 (E3S99_09975) - 2001200..2001988 (-) 789 WP_001104170.1 two-component system regulatory protein YycI -
  E3S99_RS09980 (E3S99_09980) yycH 2001989..2003323 (-) 1335 WP_001060151.1 two-component system activity regulator YycH -
  E3S99_RS09985 (E3S99_09985) walK 2003316..2005142 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=361791 E3S99_RS09970 WP_000088649.1 2000012..2000812(-) (vicX) [Staphylococcus aureus strain UP_1186]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=361791 E3S99_RS09970 WP_000088649.1 2000012..2000812(-) (vicX) [Staphylococcus aureus strain UP_1186]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACAGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCATTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGCATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACACCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474

Multiple sequence alignment