Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | E7T02_RS02610 | Genome accession | NZ_CP039296 |
| Coordinates | 461997..462455 (+) | Length | 152 a.a. |
| NCBI ID | WP_002365911.1 | Uniprot ID | Q8VT46 |
| Organism | Enterococcus faecalis strain VE14089 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 455110..505556 | 461997..462455 | within | 0 |
Gene organization within MGE regions
Location: 455110..505556
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E7T02_RS02560 | - | 455363..456241 (+) | 879 | WP_002377931.1 | hypothetical protein | - |
| E7T02_RS02565 | - | 456261..457076 (+) | 816 | WP_010773698.1 | LPXTG cell wall anchor domain-containing protein | - |
| E7T02_RS02570 | - | 457102..458373 (+) | 1272 | WP_011109451.1 | CHAP domain-containing protein | - |
| E7T02_RS02575 | - | 458376..458993 (+) | 618 | WP_002377936.1 | hypothetical protein | - |
| E7T02_RS02580 | - | 458977..459393 (+) | 417 | WP_002401419.1 | thioredoxin domain-containing protein | - |
| E7T02_RS02585 | - | 459393..459707 (+) | 315 | WP_002360796.1 | hypothetical protein | - |
| E7T02_RS02590 | - | 459973..460734 (+) | 762 | WP_010773700.1 | conjugal transfer protein | - |
| E7T02_RS02595 | - | 460739..460999 (+) | 261 | WP_010706916.1 | hypothetical protein | - |
| E7T02_RS02600 | - | 460999..461388 (+) | 390 | WP_002360791.1 | TcpE family conjugal transfer membrane protein | - |
| E7T02_RS02605 | - | 461420..461902 (+) | 483 | WP_002377938.1 | hypothetical protein | - |
| E7T02_RS02610 | ssb | 461997..462455 (+) | 459 | WP_002365911.1 | single-stranded DNA-binding protein | Machinery gene |
| E7T02_RS02615 | - | 462560..465052 (+) | 2493 | WP_002377939.1 | ATP-binding protein | - |
| E7T02_RS02620 | - | 465009..465407 (+) | 399 | WP_002370287.1 | lipocalin-like domain-containing protein | - |
| E7T02_RS02625 | - | 465420..467765 (+) | 2346 | WP_002377940.1 | CD3337/EF1877 family mobilome membrane protein | - |
| E7T02_RS02630 | - | 467752..470010 (+) | 2259 | WP_010774165.1 | type IV secretory system conjugative DNA transfer family protein | - |
| E7T02_RS02640 | - | 470533..471318 (+) | 786 | WP_002360778.1 | replication-relaxation family protein | - |
| E7T02_RS02645 | - | 471324..471812 (+) | 489 | WP_010710133.1 | hypothetical protein | - |
| E7T02_RS02650 | - | 472404..472670 (+) | 267 | WP_002377947.1 | hypothetical protein | - |
| E7T02_RS02655 | - | 472703..473203 (+) | 501 | WP_002360775.1 | DnaJ domain-containing protein | - |
| E7T02_RS02660 | - | 473216..473464 (+) | 249 | WP_002360773.1 | DUF3850 domain-containing protein | - |
| E7T02_RS02665 | - | 473540..473956 (+) | 417 | WP_010710134.1 | single-stranded DNA-binding protein | - |
| E7T02_RS02670 | - | 473980..474564 (+) | 585 | WP_002377949.1 | thermonuclease family protein | - |
| E7T02_RS02675 | - | 474675..474941 (+) | 267 | WP_002369771.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| E7T02_RS02680 | - | 474934..475209 (+) | 276 | WP_002360769.1 | type II toxin-antitoxin system YafQ family toxin | - |
| E7T02_RS02685 | - | 475400..476044 (-) | 645 | WP_002377952.1 | IS6 family transposase | - |
| E7T02_RS02690 | - | 476177..477059 (+) | 883 | Protein_478 | IS256 family transposase | - |
| E7T02_RS02695 | - | 477364..478401 (-) | 1038 | WP_002355369.1 | PTS sugar transporter subunit IIC | - |
| E7T02_RS02700 | - | 478427..479365 (-) | 939 | WP_002370935.1 | 2-dehydropantoate 2-reductase | - |
| E7T02_RS02705 | - | 479493..479762 (-) | 270 | Protein_481 | LPXTG cell wall anchor domain-containing protein | - |
| E7T02_RS02710 | - | 479852..480037 (+) | 186 | WP_002358660.1 | hypothetical protein | - |
| E7T02_RS02715 | - | 480069..480677 (+) | 609 | Protein_483 | IS6 family transposase | - |
| E7T02_RS02725 | bsh | 481346..482320 (-) | 975 | WP_002355428.1 | choloylglycine hydrolase | - |
| E7T02_RS02730 | - | 482544..483188 (+) | 645 | WP_002377952.1 | IS6 family transposase | - |
| E7T02_RS02735 | - | 483361..483675 (+) | 315 | WP_002403043.1 | hypothetical protein | - |
| E7T02_RS02740 | cylR2 | 484013..484213 (-) | 201 | WP_002370931.1 | cytolysin regulator CylR2 | - |
| E7T02_RS02750 | cylL-L | 484617..484823 (+) | 207 | WP_002358485.1 | lanthipeptide cytolysin subunit CylL-L | - |
| E7T02_RS02755 | cylL-S | 484857..485048 (+) | 192 | WP_002358181.1 | lanthipeptide cytolysin subunit CylL-S | - |
| E7T02_RS02760 | - | 485109..488090 (+) | 2982 | WP_002370929.1 | type 2 lanthipeptide synthetase LanM family protein | - |
| E7T02_RS02765 | - | 488102..488914 (+) | 813 | WP_010774166.1 | cysteine peptidase family C39 domain-containing protein | - |
| E7T02_RS02775 | - | 489000..490172 (+) | 1173 | WP_000195429.1 | IS256-like element IS256 family transposase | - |
| E7T02_RS02780 | - | 490242..491144 (+) | 903 | Protein_493 | YSIRK-targeted surface antigen transcriptional regulator | - |
| E7T02_RS02785 | - | 491274..491690 (+) | 417 | WP_002358522.1 | hypothetical protein | - |
| E7T02_RS02795 | - | 491826..491927 (-) | 102 | Protein_495 | IS30 family transposase | - |
| E7T02_RS02800 | - | 491915..492652 (+) | 738 | WP_002401428.1 | hypothetical protein | - |
| E7T02_RS02805 | - | 492698..493318 (-) | 621 | WP_033591050.1 | recombinase family protein | - |
| E7T02_RS02810 | - | 493502..494121 (+) | 620 | Protein_498 | recombinase family protein | - |
| E7T02_RS02815 | - | 494230..494412 (+) | 183 | WP_002358529.1 | hypothetical protein | - |
| E7T02_RS02820 | - | 494868..495686 (-) | 819 | WP_002358531.1 | MurR/RpiR family transcriptional regulator | - |
| E7T02_RS02825 | - | 495842..496549 (+) | 708 | WP_002358533.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| E7T02_RS02830 | - | 496542..498044 (+) | 1503 | WP_002358534.1 | PTS transporter subunit EIIC | - |
| E7T02_RS02835 | - | 498055..498537 (+) | 483 | WP_002358535.1 | PTS glucose transporter subunit IIA | - |
| E7T02_RS02840 | - | 499170..499934 (-) | 765 | WP_002358536.1 | YibE/F family protein | - |
| E7T02_RS02845 | - | 499931..500986 (-) | 1056 | WP_002401430.1 | YibE/F family protein | - |
| E7T02_RS02850 | rpmF | 501325..501498 (+) | 174 | WP_002358539.1 | 50S ribosomal protein L32 | - |
| E7T02_RS02855 | - | 501520..501897 (+) | 378 | WP_002382844.1 | hypothetical protein | - |
| E7T02_RS02860 | - | 501949..502353 (+) | 405 | WP_002358541.1 | NusG domain II-containing protein | - |
| E7T02_RS02865 | - | 502547..503617 (+) | 1071 | WP_010710139.1 | ammonium transporter | - |
| E7T02_RS02870 | - | 503720..504853 (+) | 1134 | WP_002377959.1 | NAD(P)/FAD-dependent oxidoreductase | - |
Sequence
Protein
Download Length: 152 a.a. Molecular weight: 17179.08 Da Isoelectric Point: 4.6511
>NTDB_id=357947 E7T02_RS02610 WP_002365911.1 461997..462455(+) (ssb) [Enterococcus faecalis strain VE14089]
MINNVTLVGRLTKDPDLRYTQSGTAVGQFTLAINRNFTNANNEREADFINCVIWRKAAESLANYATKGTLIGLTGRIQTR
NYENQQGQRIYVTEVVTESFQLLESREVNEQRKEQATGKATFDKQSMDKPDPLDPFSPENSIVDISDNDLPF
MINNVTLVGRLTKDPDLRYTQSGTAVGQFTLAINRNFTNANNEREADFINCVIWRKAAESLANYATKGTLIGLTGRIQTR
NYENQQGQRIYVTEVVTESFQLLESREVNEQRKEQATGKATFDKQSMDKPDPLDPFSPENSIVDISDNDLPF
Nucleotide
Download Length: 459 bp
>NTDB_id=357947 E7T02_RS02610 WP_002365911.1 461997..462455(+) (ssb) [Enterococcus faecalis strain VE14089]
TTGATTAATAACGTTACATTAGTTGGACGATTAACCAAAGACCCAGATTTAAGGTATACGCAAAGTGGAACAGCCGTAGG
TCAATTTACGTTGGCCATTAATCGCAACTTTACCAATGCTAACAATGAAAGGGAAGCAGATTTTATCAACTGTGTTATTT
GGCGGAAAGCTGCAGAGTCATTAGCAAATTATGCAACAAAAGGGACTCTGATCGGTTTAACTGGTCGCATTCAAACAAGA
AACTATGAGAATCAACAAGGCCAGCGTATTTATGTAACTGAGGTTGTCACAGAAAGCTTCCAACTATTAGAATCAAGAGA
AGTAAACGAGCAACGAAAAGAACAGGCTACAGGTAAAGCTACGTTTGATAAACAGTCAATGGATAAACCTGATCCTCTGG
ATCCATTTTCGCCAGAAAATAGCATAGTGGATATTTCTGATAATGACCTGCCGTTTTAA
TTGATTAATAACGTTACATTAGTTGGACGATTAACCAAAGACCCAGATTTAAGGTATACGCAAAGTGGAACAGCCGTAGG
TCAATTTACGTTGGCCATTAATCGCAACTTTACCAATGCTAACAATGAAAGGGAAGCAGATTTTATCAACTGTGTTATTT
GGCGGAAAGCTGCAGAGTCATTAGCAAATTATGCAACAAAAGGGACTCTGATCGGTTTAACTGGTCGCATTCAAACAAGA
AACTATGAGAATCAACAAGGCCAGCGTATTTATGTAACTGAGGTTGTCACAGAAAGCTTCCAACTATTAGAATCAAGAGA
AGTAAACGAGCAACGAAAAGAACAGGCTACAGGTAAAGCTACGTTTGATAAACAGTCAATGGATAAACCTGATCCTCTGG
ATCCATTTTCGCCAGAAAATAGCATAGTGGATATTTCTGATAATGACCTGCCGTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
56.471 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
47.283 |
100 |
0.572 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
69.737 |
0.395 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
50 |
76.316 |
0.382 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
53.774 |
69.737 |
0.375 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
49.138 |
76.316 |
0.375 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
48.276 |
76.316 |
0.368 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
48.276 |
76.316 |
0.368 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
48.276 |
76.316 |
0.368 |
| ssbB/cilA | Streptococcus mitis SK321 |
48.276 |
76.316 |
0.368 |