Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   GOM47_RS07895 Genome accession   NZ_CP046524
Coordinates   1554341..1556677 (-) Length   778 a.a.
NCBI ID   WP_235080442.1    Uniprot ID   -
Organism   Streptococcus oralis strain SOT     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1549341..1561677
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOM47_RS07875 (GOM47_07870) serS 1549681..1550955 (+) 1275 WP_235080439.1 serine--tRNA ligase -
  GOM47_RS07880 (GOM47_07875) - 1550981..1551880 (-) 900 WP_235080440.1 TDT family transporter -
  GOM47_RS07885 (GOM47_07880) - 1551992..1552540 (-) 549 WP_000206774.1 carboxymuconolactone decarboxylase family protein -
  GOM47_RS07890 (GOM47_07885) - 1552672..1553994 (-) 1323 WP_235080441.1 alanine/glycine:cation symporter family protein -
  GOM47_RS07895 (GOM47_07890) mutS/mutS2 1554341..1556677 (-) 2337 WP_235080442.1 endonuclease MutS2 Machinery gene
  GOM47_RS07900 (GOM47_07895) - 1556778..1557326 (-) 549 WP_235080443.1 CvpA family protein -
  GOM47_RS07905 (GOM47_07900) zapA 1557323..1557625 (-) 303 WP_000002028.1 cell division protein ZapA -
  GOM47_RS07910 (GOM47_07905) rnhC 1557712..1558593 (+) 882 WP_235080444.1 ribonuclease HIII -
  GOM47_RS07915 (GOM47_07910) lepB 1558597..1559211 (+) 615 WP_235080445.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87743.63 Da        Isoelectric Point: 6.9336

>NTDB_id=352837 GOM47_RS07895 WP_235080442.1 1554341..1556677(-) (mutS/mutS2) [Streptococcus oralis strain SOT]
MNTKILETLEFNKIKALFEPHLLTEQGLEELKSLVPTAKVDKIKQAFTEMEEMQALFVEQPHFSILGTREISSVCRRLEM
GADLNIEEFLLLKRVLLASRELQSFYANLENVRLAQLARWFEKLHDFPHLQGSLQALNDAGFIENFASEELARIRRKIHD
SESQVRDVLHDLLKQKAQMLTEGIIASRNGRQVLPVKNTYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADER
YEMIRILQELSERVRPHANEIANDAWIIGHLDLIRAKVRFIQEMQAVVPQLSENQEIQLLHVRHPLVKNAVANDVHFGKE
LTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPILADKGSRVGVFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILSKVN
QHSLLLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPG
RSNAFEIAKRLGLSDVIVGDASQQVNQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENLKMNRALKKLYNELNREKETE
LNKAREQAAEIVELALSESDQILKNLHSKSQLKPHEIIEAKAELKKLAPEKVYLSKNKVLQKAKKKRAPKVGDDIVVLSY
GQRGTLTNQLKDGRWEAQVGLIKMTLEEKEFDLVQSQQEAPVKKKQVNVVKRASDRGPQARLDLRGKRYEEAMNELDAFI
DQALLNNMAQVDIIHGIGTGVIREGVTKYLQRNKHVKSFGYAPQNAGGSGATIVTFKG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=352837 GOM47_RS07895 WP_235080442.1 1554341..1556677(-) (mutS/mutS2) [Streptococcus oralis strain SOT]
ATGAATACAAAAATACTAGAAACCTTAGAATTTAATAAAATCAAAGCCTTATTTGAACCTCATCTCTTGACAGAACAAGG
ACTAGAGGAGTTAAAAAGCTTGGTTCCAACTGCTAAGGTGGATAAGATCAAACAAGCCTTTACAGAGATGGAGGAAATGC
AAGCCCTATTTGTGGAGCAACCTCACTTTTCCATCCTAGGGACACGTGAGATCTCATCTGTTTGCAGGCGTTTGGAGATG
GGGGCAGACCTCAATATCGAGGAGTTCCTACTCCTCAAACGGGTCTTGCTTGCCAGCAGAGAGTTGCAAAGTTTTTATGC
CAATCTAGAAAACGTACGCTTGGCACAGTTGGCGAGATGGTTTGAAAAACTGCATGATTTTCCACACTTGCAAGGGAGTC
TTCAAGCCCTAAATGATGCAGGATTTATCGAGAATTTTGCCAGCGAAGAACTGGCACGCATCCGTCGGAAAATCCATGAT
AGCGAGAGTCAGGTCCGAGATGTCTTACACGACCTGCTCAAGCAAAAAGCTCAGATGTTGACAGAAGGGATTATCGCTAG
TAGAAATGGGCGTCAAGTCTTACCAGTCAAGAACACCTACCGCAACAAGATCGCAGGTGTTGTTCATGACATCTCTGCCA
GTGGAAACACGGTCTACATCGAGCCGCGTGAGGTCGTGAAGCTGAGCGAAGAAATTGCTAGTCTACGAGCTGACGAACGC
TATGAGATGATTCGCATCCTGCAGGAACTCTCAGAACGGGTTCGTCCTCATGCTAATGAGATTGCTAATGACGCTTGGAT
TATCGGCCATTTAGACTTGATTCGTGCAAAGGTGCGTTTTATTCAAGAAATGCAAGCGGTTGTTCCTCAACTTTCAGAGA
ATCAAGAGATTCAACTCCTTCATGTTCGTCACCCTTTGGTCAAAAATGCTGTCGCAAACGATGTACATTTTGGTAAGGAA
TTAACGGCCATTGTCATTACAGGTCCCAATACAGGTGGTAAGACCATCATGCTCAAAACCCTGGGCTTGACTCAACTCAT
GGCCCAATCTGGATTACCCATTCTAGCTGATAAGGGGAGCCGTGTCGGTGTTTTCGAGGAAATCTTCGCAGATATTGGGG
ATGAACAGTCTATTGAGCAAAGCTTGTCTACCTTTTCCAGCCACATGACCAATATCGTAGATATTCTTAGCAAGGTCAAC
CAACACTCGCTTTTATTACTAGATGAGCTCGGGGCTGGTACCGATCCGCAGGAAGGAGCAGCACTTGCTATGGCTATTTT
GGAGGATCTTCGTCTCCGTCAGGTCAAGACTATGGCGACGACCCACTATCCAGAGCTCAAGGCTTACGGTATCGAAACAG
CCTTTGTGCAAAATGCCAGCATGGAGTTTGATACTGCGACTCTTCGCCCGACCTATCGCTTTATGCAGGGCGTTCCTGGT
CGAAGCAATGCCTTTGAAATTGCCAAACGTCTGGGCTTGTCAGATGTCATCGTAGGAGATGCCAGCCAGCAGGTCAATCA
AGATAATGATGTCAACCGTATCATTGAACAATTGGAAGAGCAAACGCTTGAAAGTCGCAAACGCTTGGACAATATTCGTG
AGGTGGAGCAAGAAAATCTTAAGATGAACCGAGCACTCAAAAAACTCTACAACGAACTCAATCGCGAGAAGGAAACAGAG
CTTAACAAGGCGCGTGAACAAGCTGCTGAGATTGTGGAACTCGCTCTAAGTGAGAGTGACCAGATTCTTAAGAACCTCCA
CAGTAAGTCTCAACTCAAACCTCACGAAATCATTGAAGCCAAGGCTGAACTGAAAAAATTGGCTCCTGAAAAAGTCTACT
TGTCTAAAAACAAGGTCCTTCAAAAAGCCAAGAAAAAACGAGCACCAAAGGTTGGAGATGATATTGTGGTCCTCAGTTAT
GGTCAACGTGGAACCTTGACCAATCAGCTTAAGGACGGCCGTTGGGAAGCCCAAGTTGGCTTGATCAAGATGACCTTGGA
AGAGAAAGAATTTGACCTTGTTCAGAGCCAACAAGAAGCCCCAGTCAAGAAAAAACAAGTCAATGTCGTCAAACGTGCTT
CTGATCGTGGTCCGCAAGCCAGACTGGATCTCCGAGGCAAACGGTACGAAGAGGCCATGAATGAGCTGGACGCCTTTATC
GACCAAGCCCTGCTTAATAACATGGCGCAGGTAGATATTATCCATGGTATCGGAACAGGAGTCATCCGTGAGGGCGTCAC
CAAATACCTGCAAAGAAACAAGCATGTCAAGAGTTTTGGCTATGCTCCACAAAATGCTGGAGGCAGTGGTGCCACCATTG
TGACCTTTAAAGGATAG

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-506)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

Smr domain (Smr)

(702-777)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

41.318

100

0.419

Multiple sequence alignment