Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | KAN02_RS01750 | Genome accession | NZ_CP036171 |
| Coordinates | 375805..376254 (+) | Length | 149 a.a. |
| NCBI ID | WP_087606422.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain KAN02 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 370805..381254
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KAN02_RS01730 (KAN02_01730) | - | 372193..373080 (+) | 888 | WP_004705204.1 | metal-dependent hydrolase | - |
| KAN02_RS01735 (KAN02_01735) | - | 373212..373802 (+) | 591 | WP_087606419.1 | LemA family protein | - |
| KAN02_RS01740 (KAN02_01740) | - | 373824..374906 (+) | 1083 | WP_087606420.1 | TPM domain-containing protein | - |
| KAN02_RS01745 (KAN02_01745) | - | 374900..375460 (+) | 561 | WP_087606421.1 | TPM domain-containing protein | - |
| KAN02_RS01750 (KAN02_01750) | comP | 375805..376254 (+) | 450 | WP_087606422.1 | pilin | Machinery gene |
| KAN02_RS01755 (KAN02_01755) | - | 376378..378012 (+) | 1635 | WP_165395672.1 | O-antigen ligase family protein | - |
| KAN02_RS01760 (KAN02_01760) | - | 378177..379805 (+) | 1629 | WP_087606424.1 | PglL family O-oligosaccharyltransferase | - |
| KAN02_RS01765 (KAN02_01765) | bfr | 379846..380310 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| KAN02_RS01770 (KAN02_01770) | - | 380555..380749 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15228.53 Da Isoelectric Point: 8.4633
>NTDB_id=347283 KAN02_RS01750 WP_087606422.1 375805..376254(+) (comP) [Acinetobacter nosocomialis strain KAN02]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYIVRSKVTEGLNLASSYKTVIAENAGNGASSLVLGVPNFTPTDSVASI
TPDAASGAIQITYTGKVKGIVLTLTPFDGGAANAAAIAAGTVPTNQITWRCSVATPATNNKYVPANCRS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYIVRSKVTEGLNLASSYKTVIAENAGNGASSLVLGVPNFTPTDSVASI
TPDAASGAIQITYTGKVKGIVLTLTPFDGGAANAAAIAAGTVPTNQITWRCSVATPATNNKYVPANCRS
Nucleotide
Download Length: 450 bp
>NTDB_id=347283 KAN02_RS01750 WP_087606422.1 375805..376254(+) (comP) [Acinetobacter nosocomialis strain KAN02]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTTGTAGCGATTATTGGTATTTTAGCAGCGATCGCGAT
TCCTGCTTATCAGGATTACATTGTCCGCTCAAAAGTAACAGAAGGTTTAAATCTAGCATCCTCTTATAAAACTGTAATTG
CTGAAAATGCAGGAAATGGTGCTTCAAGTTTAGTTTTAGGAGTGCCTAATTTTACTCCAACTGATAGTGTTGCATCAATT
ACGCCAGATGCTGCTTCAGGCGCAATTCAGATCACTTACACAGGTAAAGTAAAAGGTATCGTACTTACTTTAACTCCTTT
TGATGGCGGTGCTGCTAACGCAGCAGCAATAGCTGCAGGAACAGTTCCAACAAATCAAATTACTTGGAGATGTTCAGTAG
CTACACCAGCAACTAATAATAAATATGTACCAGCGAATTGCCGTAGCTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTTGTAGCGATTATTGGTATTTTAGCAGCGATCGCGAT
TCCTGCTTATCAGGATTACATTGTCCGCTCAAAAGTAACAGAAGGTTTAAATCTAGCATCCTCTTATAAAACTGTAATTG
CTGAAAATGCAGGAAATGGTGCTTCAAGTTTAGTTTTAGGAGTGCCTAATTTTACTCCAACTGATAGTGTTGCATCAATT
ACGCCAGATGCTGCTTCAGGCGCAATTCAGATCACTTACACAGGTAAAGTAAAAGGTATCGTACTTACTTTAACTCCTTT
TGATGGCGGTGCTGCTAACGCAGCAGCAATAGCTGCAGGAACAGTTCCAACAAATCAAATTACTTGGAGATGTTCAGTAG
CTACACCAGCAACTAATAATAAATATGTACCAGCGAATTGCCGTAGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Acinetobacter baylyi ADP1 |
47.561 |
100 |
0.523 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
48.447 |
100 |
0.523 |
| pilA2 | Legionella pneumophila str. Paris |
47.333 |
100 |
0.477 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
46.667 |
100 |
0.47 |
| pilA/pilA1 | Eikenella corrodens VA1 |
39.506 |
100 |
0.43 |
| pilA | Acinetobacter baumannii strain A118 |
42.759 |
97.315 |
0.416 |
| pilA | Pseudomonas aeruginosa PAK |
36.875 |
100 |
0.396 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
39.597 |
100 |
0.396 |
| pilA | Acinetobacter nosocomialis M2 |
52.294 |
73.154 |
0.383 |