Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | EXW35_RS10535 | Genome accession | NZ_CP035965 |
| Coordinates | 2066750..2067124 (+) | Length | 124 a.a. |
| NCBI ID | WP_215551069.1 | Uniprot ID | - |
| Organism | Bacillus mycoides strain BPN09/1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2061750..2072124
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW35_RS10520 (EXW35_10755) | - | 2062905..2064680 (+) | 1776 | WP_215550967.1 | UvrD-helicase domain-containing protein | - |
| EXW35_RS10525 (EXW35_10760) | - | 2065352..2065561 (+) | 210 | WP_215550968.1 | hypothetical protein | - |
| EXW35_RS10530 (EXW35_10765) | - | 2066045..2066488 (-) | 444 | WP_215550969.1 | hypothetical protein | - |
| EXW35_RS10535 (EXW35_10770) | ssbA | 2066750..2067124 (+) | 375 | WP_215551069.1 | single-stranded DNA-binding protein | Machinery gene |
| EXW35_RS10540 (EXW35_10775) | - | 2067280..2068407 (+) | 1128 | WP_002012566.1 | conserved virulence factor C family protein | - |
| EXW35_RS10545 (EXW35_10780) | - | 2068411..2068794 (+) | 384 | WP_002085930.1 | DUF393 domain-containing protein | - |
| EXW35_RS10550 (EXW35_10785) | - | 2068877..2069311 (+) | 435 | WP_002012568.1 | BrxA/BrxB family bacilliredoxin | - |
| EXW35_RS10555 (EXW35_10790) | - | 2069361..2070137 (+) | 777 | WP_002127165.1 | class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 124 a.a. Molecular weight: 14467.41 Da Isoelectric Point: 9.5986
>NTDB_id=345366 EXW35_RS10535 WP_215551069.1 2066750..2067124(+) (ssbA) [Bacillus mycoides strain BPN09/1]
MQSNYYTHKLVQRLNRVVLIGRLTKEPELYYTKQGVAYARICVAVNRGFRNSLGEQQVDFINCVVWRRSAENVTEYCTKG
SLVGITGRIHTSNYDDEQGKRVYRTEVLIENITFLERRRESASQ
MQSNYYTHKLVQRLNRVVLIGRLTKEPELYYTKQGVAYARICVAVNRGFRNSLGEQQVDFINCVVWRRSAENVTEYCTKG
SLVGITGRIHTSNYDDEQGKRVYRTEVLIENITFLERRRESASQ
Nucleotide
Download Length: 375 bp
>NTDB_id=345366 EXW35_RS10535 WP_215551069.1 2066750..2067124(+) (ssbA) [Bacillus mycoides strain BPN09/1]
ATACAATCCAATTATTACACTCATAAATTAGTACAGAGATTAAATCGAGTTGTATTAATCGGTAGATTGACAAAGGAGCC
AGAATTATACTACACAAAACAAGGTGTCGCTTATGCACGAATATGTGTTGCGGTGAATAGAGGTTTTCGAAATAGTTTAG
GTGAGCAACAAGTAGATTTTATTAATTGTGTTGTATGGAGAAGGTCGGCTGAAAATGTAACAGAATATTGTACGAAAGGC
TCACTTGTTGGGATTACAGGGCGTATTCATACGAGTAATTACGATGATGAACAAGGAAAGAGAGTATATAGAACTGAAGT
TCTGATTGAGAATATTACATTTTTAGAGAGAAGGCGGGAGAGTGCATCGCAATAA
ATACAATCCAATTATTACACTCATAAATTAGTACAGAGATTAAATCGAGTTGTATTAATCGGTAGATTGACAAAGGAGCC
AGAATTATACTACACAAAACAAGGTGTCGCTTATGCACGAATATGTGTTGCGGTGAATAGAGGTTTTCGAAATAGTTTAG
GTGAGCAACAAGTAGATTTTATTAATTGTGTTGTATGGAGAAGGTCGGCTGAAAATGTAACAGAATATTGTACGAAAGGC
TCACTTGTTGGGATTACAGGGCGTATTCATACGAGTAATTACGATGATGAACAAGGAAAGAGAGTATATAGAACTGAAGT
TCTGATTGAGAATATTACATTTTTAGAGAGAAGGCGGGAGAGTGCATCGCAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
58.095 |
84.677 |
0.492 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
50 |
90.323 |
0.452 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
53.333 |
84.677 |
0.452 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
42.982 |
91.935 |
0.395 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
42.593 |
87.097 |
0.371 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
42.593 |
87.097 |
0.371 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
41.667 |
87.097 |
0.363 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
41.667 |
87.097 |
0.363 |
| ssbB/cilA | Streptococcus mitis SK321 |
41.667 |
87.097 |
0.363 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
41.667 |
87.097 |
0.363 |