Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | EWA64_RS13420 | Genome accession | NZ_CP035921 |
| Coordinates | 2686322..2686627 (+) | Length | 101 a.a. |
| NCBI ID | WP_061895163.1 | Uniprot ID | - |
| Organism | Vibrio cidicii strain 2423-01 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2681322..2691627
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EWA64_RS13405 | lon | 2681336..2683687 (+) | 2352 | WP_061895161.1 | endopeptidase La | - |
| EWA64_RS13410 | - | 2683882..2684154 (+) | 273 | WP_045570950.1 | HU family DNA-binding protein | - |
| EWA64_RS13415 | ppiD | 2684330..2686189 (+) | 1860 | WP_061895162.1 | peptidylprolyl isomerase | - |
| EWA64_RS13420 | comEA | 2686322..2686627 (+) | 306 | WP_061895163.1 | ComEA family DNA-binding protein | Machinery gene |
| EWA64_RS13425 | rrtA | 2686667..2687323 (-) | 657 | WP_139045708.1 | rhombosortase | - |
| EWA64_RS13430 | - | 2687222..2687833 (+) | 612 | WP_061895165.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| EWA64_RS13435 | - | 2687830..2689149 (-) | 1320 | WP_061895166.1 | anti-phage deoxyguanosine triphosphatase | - |
| EWA64_RS13440 | yfbR | 2689170..2689754 (-) | 585 | WP_061895167.1 | 5'-deoxynucleotidase | - |
| EWA64_RS13445 | - | 2689833..2691047 (-) | 1215 | WP_061895168.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 10769.51 Da Isoelectric Point: 9.8633
>NTDB_id=345009 EWA64_RS13420 WP_061895163.1 2686322..2686627(+) (comEA) [Vibrio cidicii strain 2423-01]
MKRILVSIALVLSCLFSFTANANEAPAKVDKHEGIEITVNINSASAEEIAALLKGIGIKKAQQIVADREANGPFQSAEDL
ARVKGIGPSTVAKNQERIKLK
MKRILVSIALVLSCLFSFTANANEAPAKVDKHEGIEITVNINSASAEEIAALLKGIGIKKAQQIVADREANGPFQSAEDL
ARVKGIGPSTVAKNQERIKLK
Nucleotide
Download Length: 306 bp
>NTDB_id=345009 EWA64_RS13420 WP_061895163.1 2686322..2686627(+) (comEA) [Vibrio cidicii strain 2423-01]
ATGAAAAGGATACTGGTATCTATCGCACTTGTTTTGAGTTGTTTGTTTTCCTTTACGGCGAACGCTAACGAGGCACCAGC
GAAAGTCGACAAGCATGAAGGGATTGAGATCACCGTCAACATCAACAGTGCAAGCGCAGAAGAAATCGCCGCGTTGCTGA
AAGGCATCGGGATTAAGAAAGCGCAGCAGATTGTTGCTGATCGTGAGGCGAATGGTCCCTTTCAGTCGGCGGAAGATTTA
GCGCGTGTTAAGGGCATTGGCCCATCAACGGTGGCGAAGAATCAAGAGCGGATCAAGTTGAAGTAG
ATGAAAAGGATACTGGTATCTATCGCACTTGTTTTGAGTTGTTTGTTTTCCTTTACGGCGAACGCTAACGAGGCACCAGC
GAAAGTCGACAAGCATGAAGGGATTGAGATCACCGTCAACATCAACAGTGCAAGCGCAGAAGAAATCGCCGCGTTGCTGA
AAGGCATCGGGATTAAGAAAGCGCAGCAGATTGTTGCTGATCGTGAGGCGAATGGTCCCTTTCAGTCGGCGGAAGATTTA
GCGCGTGTTAAGGGCATTGGCCCATCAACGGTGGCGAAGAATCAAGAGCGGATCAAGTTGAAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
58.333 |
95.05 |
0.554 |
| comEA | Vibrio cholerae strain A1552 |
58.333 |
95.05 |
0.554 |
| comEA | Vibrio campbellii strain DS40M4 |
54 |
99.01 |
0.535 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
60.92 |
86.139 |
0.525 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
39.091 |
100 |
0.426 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
50 |
79.208 |
0.396 |
| comE | Neisseria gonorrhoeae MS11 |
39.175 |
96.04 |
0.376 |
| comE | Neisseria gonorrhoeae MS11 |
39.175 |
96.04 |
0.376 |
| comE | Neisseria gonorrhoeae MS11 |
39.175 |
96.04 |
0.376 |
| comE | Neisseria gonorrhoeae MS11 |
39.175 |
96.04 |
0.376 |
| comEA | Legionella pneumophila str. Paris |
39.362 |
93.069 |
0.366 |
| comEA | Legionella pneumophila strain ERS1305867 |
39.362 |
93.069 |
0.366 |