Detailed information
Bioinformatically predicted
Overview
| Name | comYA | Type | Machinery gene |
| Locus tag | ETT46_RS00660 | Genome accession | NZ_CP035453 |
| Coordinates | 101948..102901 (+) | Length | 317 a.a. |
| NCBI ID | WP_030126921.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain emm100 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 96948..107901
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETT46_RS00650 (ETT46_00650) | rpoC | 97715..101338 (+) | 3624 | WP_011527438.1 | DNA-directed RNA polymerase subunit beta' | - |
| ETT46_RS00655 (ETT46_00655) | - | 101490..101855 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| ETT46_RS00660 (ETT46_00660) | comYA | 101948..102901 (+) | 954 | WP_030126921.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ETT46_RS00665 (ETT46_00665) | comYB | 102837..103871 (+) | 1035 | WP_227877282.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ETT46_RS00670 (ETT46_00670) | comYC | 103873..104199 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ETT46_RS00675 (ETT46_00675) | comGD | 104174..104602 (+) | 429 | WP_023605232.1 | competence type IV pilus minor pilin ComGD | - |
| ETT46_RS00680 (ETT46_00680) | comGE | 104559..104843 (+) | 285 | WP_011284422.1 | competence type IV pilus minor pilin ComGE | - |
| ETT46_RS00685 (ETT46_00685) | comYF | 104836..105270 (+) | 435 | WP_002992738.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ETT46_RS00690 (ETT46_00690) | comGG | 105254..105580 (+) | 327 | WP_002992739.1 | competence type IV pilus minor pilin ComGG | - |
| ETT46_RS00695 (ETT46_00695) | comYH | 105678..106631 (+) | 954 | WP_002987790.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ETT46_RS00700 (ETT46_00700) | - | 106690..107886 (+) | 1197 | WP_109821056.1 | acetate kinase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35528.92 Da Isoelectric Point: 8.8659
>NTDB_id=342380 ETT46_RS00660 WP_030126921.1 101948..102901(+) (comYA) [Streptococcus pyogenes strain emm100]
MVQALAKAILAKAILAKAEQVQAQDIYILPRADQYDLFLRIGDERRLVDVYQSDRMAPLISHFKFVAGMIVGEKRRCQVG
SCDYKLSKDKQLSLRLSSVGDYRGQESLVIRLLHHQNKSVHYWFDGLTKVANQVGGRGLYLFAGPVGSGKTTLMYQLISS
YHQEAQVISIEDPVEIKNHQILQLQVNDDIGMTYDNLIKLSLRHRPDILVIGEIRDSQTARAVIRASLTGAMVFSTVHAK
SISGVYARLLELGVTKAELSNCLALIAYQRLLNGGALIDSTQNEFEYYSSSNWNQQIDQLLEAGHLNPKQAKLEKII
MVQALAKAILAKAILAKAEQVQAQDIYILPRADQYDLFLRIGDERRLVDVYQSDRMAPLISHFKFVAGMIVGEKRRCQVG
SCDYKLSKDKQLSLRLSSVGDYRGQESLVIRLLHHQNKSVHYWFDGLTKVANQVGGRGLYLFAGPVGSGKTTLMYQLISS
YHQEAQVISIEDPVEIKNHQILQLQVNDDIGMTYDNLIKLSLRHRPDILVIGEIRDSQTARAVIRASLTGAMVFSTVHAK
SISGVYARLLELGVTKAELSNCLALIAYQRLLNGGALIDSTQNEFEYYSSSNWNQQIDQLLEAGHLNPKQAKLEKII
Nucleotide
Download Length: 954 bp
>NTDB_id=342380 ETT46_RS00660 WP_030126921.1 101948..102901(+) (comYA) [Streptococcus pyogenes strain emm100]
ATGGTACAAGCATTAGCAAAAGCTATTCTAGCAAAAGCTATTCTAGCAAAAGCTGAACAGGTTCAGGCACAAGATATTTA
TATTTTGCCAAGAGCAGATCAATATGATCTTTTTTTACGAATAGGAGATGAAAGGAGATTAGTTGATGTTTATCAGAGCG
ATCGGATGGCTCCTCTTATTAGTCACTTTAAATTCGTTGCAGGAATGATAGTTGGTGAAAAGAGACGTTGTCAGGTGGGT
TCATGTGATTATAAGCTTAGTAAAGATAAGCAGTTATCTTTGCGCTTATCTAGCGTGGGTGATTATCGCGGGCAAGAAAG
CTTAGTGATTCGTCTGCTTCATCATCAAAATAAAAGTGTACATTATTGGTTTGATGGATTGACAAAAGTAGCCAATCAAG
TTGGCGGTAGAGGGTTGTATTTATTTGCAGGACCAGTTGGGTCTGGGAAGACAACCTTGATGTACCAGCTGATTTCGAGT
TATCATCAAGAAGCACAGGTTATTAGTATAGAAGATCCTGTAGAAATTAAAAATCACCAGATTTTACAATTACAAGTGAA
TGATGATATTGGTATGACTTATGACAATTTGATCAAACTGTCTTTACGCCATCGACCAGATATTTTAGTTATTGGTGAGA
TTCGAGATAGTCAAACAGCAAGAGCCGTTATTAGGGCTAGTCTAACAGGTGCCATGGTTTTTTCAACGGTTCACGCTAAA
AGTATCTCGGGTGTTTATGCAAGATTGTTAGAACTTGGTGTAACGAAAGCAGAACTGTCTAATTGCTTAGCATTAATTGC
TTACCAAAGGTTACTTAATGGAGGAGCATTGATTGACTCTACTCAAAACGAATTTGAATATTATTCCTCATCGAACTGGA
ATCAACAAATTGATCAGCTTCTTGAGGCAGGACATCTCAATCCCAAGCAAGCTAAGCTTGAAAAAATTATCTAG
ATGGTACAAGCATTAGCAAAAGCTATTCTAGCAAAAGCTATTCTAGCAAAAGCTGAACAGGTTCAGGCACAAGATATTTA
TATTTTGCCAAGAGCAGATCAATATGATCTTTTTTTACGAATAGGAGATGAAAGGAGATTAGTTGATGTTTATCAGAGCG
ATCGGATGGCTCCTCTTATTAGTCACTTTAAATTCGTTGCAGGAATGATAGTTGGTGAAAAGAGACGTTGTCAGGTGGGT
TCATGTGATTATAAGCTTAGTAAAGATAAGCAGTTATCTTTGCGCTTATCTAGCGTGGGTGATTATCGCGGGCAAGAAAG
CTTAGTGATTCGTCTGCTTCATCATCAAAATAAAAGTGTACATTATTGGTTTGATGGATTGACAAAAGTAGCCAATCAAG
TTGGCGGTAGAGGGTTGTATTTATTTGCAGGACCAGTTGGGTCTGGGAAGACAACCTTGATGTACCAGCTGATTTCGAGT
TATCATCAAGAAGCACAGGTTATTAGTATAGAAGATCCTGTAGAAATTAAAAATCACCAGATTTTACAATTACAAGTGAA
TGATGATATTGGTATGACTTATGACAATTTGATCAAACTGTCTTTACGCCATCGACCAGATATTTTAGTTATTGGTGAGA
TTCGAGATAGTCAAACAGCAAGAGCCGTTATTAGGGCTAGTCTAACAGGTGCCATGGTTTTTTCAACGGTTCACGCTAAA
AGTATCTCGGGTGTTTATGCAAGATTGTTAGAACTTGGTGTAACGAAAGCAGAACTGTCTAATTGCTTAGCATTAATTGC
TTACCAAAGGTTACTTAATGGAGGAGCATTGATTGACTCTACTCAAAACGAATTTGAATATTATTCCTCATCGAACTGGA
ATCAACAAATTGATCAGCTTCTTGAGGCAGGACATCTCAATCCCAAGCAAGCTAAGCTTGAAAAAATTATCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYA | Streptococcus mutans UA140 |
60.759 |
99.685 |
0.606 |
| comYA | Streptococcus mutans UA159 |
60.759 |
99.685 |
0.606 |
| comGA/cglA | Streptococcus sobrinus strain NIDR 6715-7 |
60.586 |
96.845 |
0.587 |
| comYA | Streptococcus gordonii str. Challis substr. CH1 |
60.586 |
96.845 |
0.587 |
| comGA/cglA/cilD | Streptococcus mitis NCTC 12261 |
59.609 |
96.845 |
0.577 |
| comGA/cglA/cilD | Streptococcus pneumoniae Rx1 |
58.958 |
96.845 |
0.571 |
| comGA/cglA/cilD | Streptococcus pneumoniae D39 |
58.958 |
96.845 |
0.571 |
| comGA/cglA/cilD | Streptococcus pneumoniae R6 |
58.958 |
96.845 |
0.571 |
| comGA/cglA/cilD | Streptococcus pneumoniae TIGR4 |
58.958 |
96.845 |
0.571 |
| comGA | Lactococcus lactis subsp. cremoris KW2 |
50 |
99.685 |
0.498 |
| comGA | Latilactobacillus sakei subsp. sakei 23K |
39.655 |
91.483 |
0.363 |