Detailed information NTG0338416

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EQH19_RS09650
• Genome accession: NZ_CP035261
• Coordinates: 1879210..1879614 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588029.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901924
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1874210..1884614

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH19_RS09615 (EQH19_10155)	rnpA	1874624..1874995 (-)	372	WP_000739246.1	ribonuclease P protein component	-
EQH19_RS10795	-	1875012..1875143 (-)	132	WP_000768904.1	hypothetical protein	-
EQH19_RS09620 (EQH19_10160)	-	1875144..1876334 (-)	1191	WP_000167757.1	acetate kinase	-
EQH19_RS09625 (EQH19_10165)	comYH	1876385..1877338 (-)	954	WP_000345135.1	class I SAM-dependent methyltransferase	Machinery gene
EQH19_RS09630 (EQH19_10170)	-	1877399..1877993 (-)	595	Protein_1891	class I SAM-dependent methyltransferase	-
EQH19_RS09635 (EQH19_10175)	comGG/cglG	1878130..1878543 (-)	414	WP_000265622.1	competence type IV pilus minor pilin ComGG	Machinery gene
EQH19_RS09640 (EQH19_10180)	comGF/cglF	1878521..1878982 (-)	462	WP_000250532.1	competence type IV pilus minor pilin ComGF	Machinery gene
EQH19_RS09645 (EQH19_10185)	comGE/cglE	1878945..1879247 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
EQH19_RS09650 (EQH19_10190)	comGD/cglD	1879210..1879614 (-)	405	WP_000588029.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQH19_RS09655 (EQH19_10195)	comGC/cglC	1879607..1879933 (-)	327	WP_000738625.1	competence type IV pilus major pilin ComGC	Machinery gene
EQH19_RS09660 (EQH19_10200)	comGB/cglB	1879935..1880951 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
EQH19_RS09665 (EQH19_10205)	comGA/cglA/cilD	1880899..1881840 (-)	942	WP_000249555.1	competence type IV pilus ATPase ComGA	Machinery gene
EQH19_RS09670 (EQH19_10210)	-	1881915..1882280 (-)	366	WP_000286415.1	DUF1033 family protein	-
EQH19_RS09675 (EQH19_10215)	-	1882431..1883489 (-)	1059	WP_000649471.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14698.94 Da
• Isoelectric Point: 10.2164

>NTDB_id=338416 EQH19_RS09650 WP_000588029.1 1879210..1879614(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901924]
MIKAFTMLESLLVLGLVSILALGLSSSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQMISNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=338416 EQH19_RS09650 WP_000588029.1 1879210..1879614(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901924]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTATCCAGCTC
TGTCCAGTCCACTTTTGCAGCAGTAGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTGGATGGGCAGATGATTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae Rx1	98.507	100	0.985
comGD/cglD	Streptococcus pneumoniae D39	98.507	100	0.985
comGD/cglD	Streptococcus pneumoniae R6	98.507	100	0.985
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae TIGR4	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	59.843	94.776	0.567
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47