Detailed information NTG0337833

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: EQH28_RS06905
• Genome accession: NZ_CP035252
• Coordinates: 1384691..1385161 (-)
• Length: 156 a.a.
• NCBI ID: WP_000609605.1
• Uniprot ID: A0AAX3HEU5
• Organism: Streptococcus pneumoniae strain TVO_1901934
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1379691..1390161

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH28_RS06875 (EQH28_07305)	-	1380266..1381201 (-)	936	WP_000036043.1	manganese-dependent inorganic pyrophosphatase	-
EQH28_RS06880 (EQH28_07310)	-	1381272..1381571 (-)	300	WP_047474632.1	GIY-YIG nuclease family protein	-
EQH28_RS06885 (EQH28_07315)	-	1381561..1382310 (-)	750	WP_000390783.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
EQH28_RS06890 (EQH28_07320)	-	1382364..1382723 (-)	360	WP_000689596.1	S1 RNA-binding domain-containing protein	-
EQH28_RS06895 (EQH28_07325)	-	1382725..1384125 (-)	1401	WP_000339026.1	bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase	-
EQH28_RS06900 (EQH28_07330)	rpsR	1384420..1384659 (-)	240	WP_000068664.1	30S ribosomal protein S18	-
EQH28_RS06905 (EQH28_07335)	ssbA	1384691..1385161 (-)	471	WP_000609605.1	single-stranded DNA-binding protein SsbA	Machinery gene
EQH28_RS06910 (EQH28_07340)	rpsF	1385173..1385463 (-)	291	WP_001151785.1	30S ribosomal protein S6	-
EQH28_RS06915 (EQH28_07345)	asnS	1385616..1386959 (-)	1344	WP_000167152.1	asparagine--tRNA ligase	-
EQH28_RS11325	-	1386978..1387343 (-)	366	Protein_1383	VOC family protein	-
EQH28_RS06925 (EQH28_07355)	-	1387336..1388523 (-)	1188	WP_000777778.1	pyridoxal phosphate-dependent aminotransferase	-
EQH28_RS06930 (EQH28_07360)	-	1388520..1389008 (-)	489	WP_000747253.1	DUF5590 domain-containing protein	-
EQH28_RS06935 (EQH28_07370)	-	1389329..1389877 (+)	549	WP_000039618.1	NADPH-dependent FMN reductase	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17367.26 Da
• Isoelectric Point: 5.2065

>NTDB_id=337833 EQH28_RS06905 WP_000609605.1 1384691..1385161(-) (ssbA) [Streptococcus pneumoniae strain TVO_1901934]
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGVTGRIQTR
SYDNQQGQRVYVTEVVAENFQMLESRSVREGHTGGAYSAPTANYSAPTNSVLDFSRNENPFGATNPLDISDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=337833 EQH28_RS06905 WP_000609605.1 1384691..1385161(-) (ssbA) [Streptococcus pneumoniae strain TVO_1901934]
ATGATTAACAATGTTGTACTTGTAGGGCGTATGACACGTGACGCTGAGTTGCGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTTAAGAGTCAAAATGGTGAACGTGAGGCTGATTTTATCAATGTCGTTATGT
GGCGCCAACAGGCTGAAAATCTTGCTAACTGGGCTAAAAAAGGCTCACTTATCGGGGTGACAGGTCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTGTCTACGTGACAGAGGTCGTGGCTGAGAATTTCCAAATGTTGGAAAGCCGTAG
TGTGCGTGAGGGTCACACAGGTGGAGCTTACTCTGCACCAACTGCAAACTATTCAGCACCTACAAATTCAGTACTAGACT
TTTCACGTAATGAAAATCCATTTGGAGCAACAAACCCATTGGATATTTCAGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.814	100	0.615
ssb	Latilactobacillus sakei subsp. sakei 23K	53.409	100	0.603
ssbB	Bacillus subtilis subsp. subtilis str. 168	55.66	67.949	0.378
ssbB	Streptococcus sobrinus strain NIDR 6715-7	54.128	69.872	0.378
ssbB/cilA	Streptococcus pneumoniae TIGR4	53.211	69.872	0.372
ssbB/cilA	Streptococcus mitis NCTC 12261	52.294	69.872	0.365
ssbB/cilA	Streptococcus pneumoniae Rx1	52.294	69.872	0.365
ssbB/cilA	Streptococcus pneumoniae D39	52.294	69.872	0.365
ssbB/cilA	Streptococcus pneumoniae R6	52.294	69.872	0.365
ssbB/cilA	Streptococcus mitis SK321	52.294	69.872	0.365