Detailed information NTG0337548

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EQH33_RS09340
• Genome accession: NZ_CP035247
• Coordinates: 1838500..1838904 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588013.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901940
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1833500..1843904

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH33_RS09305 (EQH33_09855)	rnpA	1833914..1834285 (-)	372	WP_000739246.1	ribonuclease P protein component	-
EQH33_RS10455	-	1834302..1834433 (-)	132	WP_000768904.1	hypothetical protein	-
EQH33_RS09310 (EQH33_09860)	-	1834434..1835624 (-)	1191	WP_000167766.1	acetate kinase	-
EQH33_RS09315 (EQH33_09865)	comYH	1835675..1836628 (-)	954	WP_000345101.1	class I SAM-dependent methyltransferase	Machinery gene
EQH33_RS09320 (EQH33_09870)	-	1836689..1837283 (-)	595	Protein_1828	class I SAM-dependent methyltransferase	-
EQH33_RS09325 (EQH33_09875)	comGG/cglG	1837420..1837833 (-)	414	WP_000265624.1	competence type IV pilus minor pilin ComGG	Machinery gene
EQH33_RS09330 (EQH33_09880)	comGF/cglF	1837811..1838272 (-)	462	WP_000250542.1	competence type IV pilus minor pilin ComGF	Machinery gene
EQH33_RS09335 (EQH33_09885)	comGE/cglE	1838235..1838537 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
EQH33_RS09340 (EQH33_09890)	comGD/cglD	1838500..1838904 (-)	405	WP_000588013.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQH33_RS09345 (EQH33_09895)	comGC/cglC	1838897..1839223 (-)	327	WP_000738626.1	comG operon protein ComGC	Machinery gene
EQH33_RS09350 (EQH33_09900)	comGB/cglB	1839225..1840241 (-)	1017	WP_076750272.1	competence type IV pilus assembly protein ComGB	Machinery gene
EQH33_RS09355 (EQH33_09905)	comGA/cglA/cilD	1840189..1841130 (-)	942	WP_000249556.1	competence type IV pilus ATPase ComGA	Machinery gene
EQH33_RS09360 (EQH33_09910)	-	1841206..1841571 (-)	366	WP_000286415.1	DUF1033 family protein	-
EQH33_RS09365 (EQH33_09915)	-	1841722..1842780 (-)	1059	WP_000649466.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14665.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=337548 EQH33_RS09340 WP_000588013.1 1838500..1838904(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901940]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTNLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=337548 EQH33_RS09340 WP_000588013.1 1838500..1838904(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901940]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAATCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47