Detailed information NTG0033418

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: SPT_RS10125
• Genome accession: NC_012469
• Coordinates: 1904374..1904778 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588005.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae Taiwan19F-14
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1899374..1909778

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPT_RS10090 (SPT_2037)	rnpA	1899795..1900166 (-)	372	WP_000739246.1	ribonuclease P protein component	-
SPT_RS13270 (SPT_2038)	-	1900183..1900314 (-)	132	WP_000768904.1	hypothetical protein	-
SPT_RS10095 (SPT_2039)	-	1900315..1901505 (-)	1191	WP_000167766.1	acetate kinase	-
SPT_RS10100 (SPT_2040)	comYH	1901556..1902509 (-)	954	WP_000345119.1	class I SAM-dependent methyltransferase	Machinery gene
SPT_RS10105 (SPT_2041)	-	1902570..1903157 (-)	588	WP_000679774.1	class I SAM-dependent methyltransferase	-
SPT_RS10110 (SPT_2042)	comGG/cglG	1903294..1903707 (-)	414	WP_000265630.1	competence type IV pilus minor pilin ComGG	Machinery gene
SPT_RS10115 (SPT_2043)	comGF/cglF	1903685..1904146 (-)	462	WP_000250545.1	competence type IV pilus minor pilin ComGF	Machinery gene
SPT_RS10120 (SPT_2044)	comGE/cglE	1904109..1904411 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
SPT_RS10125 (SPT_2045)	comGD/cglD	1904374..1904778 (-)	405	WP_000588005.1	competence type IV pilus minor pilin ComGD	Machinery gene
SPT_RS10130 (SPT_2046)	comGC/cglC	1904771..1905097 (-)	327	WP_000738650.1	comG operon protein ComGC	Machinery gene
SPT_RS10135 (SPT_2047)	comGB/cglB	1905099..1906115 (-)	1017	WP_013193332.1	competence type IV pilus assembly protein ComGB	Machinery gene
SPT_RS10140 (SPT_2048)	comGA/cglA/cilD	1906063..1907004 (-)	942	WP_000249567.1	competence type IV pilus ATPase ComGA	Machinery gene
SPT_RS10145 (SPT_2049)	-	1907080..1907445 (-)	366	WP_000286415.1	DUF1033 family protein	-
SPT_RS10150 (SPT_2050)	-	1907596..1908654 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14636.81 Da
• Isoelectric Point: 10.2164

>NTDB_id=33418 SPT_RS10125 WP_000588005.1 1904374..1904778(-) (comGD/cglD) [Streptococcus pneumoniae Taiwan19F-14]
MIKAFTMLESLLALSLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTISNGSQKLPV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=33418 SPT_RS10125 WP_000588005.1 1904374..1904778(-) (comGD/cglD) [Streptococcus pneumoniae Taiwan19F-14]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGCTTTGAGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCAGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae Rx1	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae D39	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae R6	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478