Detailed information NTG0033414

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: BSN5_RS04610
• Genome accession: NC_014976
• Coordinates: 844546..845151 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis BSn5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 839546..850151

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSN5_RS04580 (BSn5_04645)	-	840359..840748 (+)	390	WP_031315243.1	TIGR04086 family membrane protein	-
BSN5_RS04585 (BSn5_04650)	yajC	840805..841071 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
BSN5_RS04590 (BSn5_04655)	tgt	841108..842253 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
BSN5_RS04595 (BSn5_04660)	queA	842280..843308 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
BSN5_RS04600 (BSn5_04665)	yrzS	843338..843538 (-)	201	WP_015714444.1	DUF2905 domain-containing protein	-
BSN5_RS04605 (BSn5_04670)	ruvB	843531..844535 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
BSN5_RS04610 (BSn5_04675)	ruvA	844546..845151 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
BSN5_RS04615 (BSn5_04680)	bofC	845290..845802 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
BSN5_RS04620 (BSn5_04685)	csbX	845850..847157 (-)	1308	WP_015714445.1	MFS transporter	-
BSN5_RS04625 (BSn5_04690)	iolG	847228..848253 (-)	1026	WP_015714446.1	inositol 2-dehydrogenase	-
BSN5_RS04630 (BSn5_04695)	yrzF	848491..849138 (+)	648	WP_003246159.1	phosphotransferase	-
BSN5_RS21885 (BSn5_04700)	-	849184..849306 (-)	123	WP_003229707.1	hypothetical protein	-
BSN5_RS22260	-	849391..849465 (+)	75	Protein_929	hypothetical protein	-
BSN5_RS21890 (BSn5_04705)	-	849469..849837 (+)	369	WP_262481567.1	DUF5412 domain-containing protein	-
BSN5_RS04645 (BSn5_04710)	-	849844..849984 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=33414 BSN5_RS04610 WP_003229717.1 844546..845151(-) (ruvA) [Bacillus subtilis BSn5]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=33414 BSN5_RS04610 WP_003229717.1 844546..845151(-) (ruvA) [Bacillus subtilis BSn5]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAGGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408