Detailed information NTG0327636

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: FNV59_RS21470
• Genome accession: NZ_CP041650
• Coordinates: 4681095..4681775 (-)
• Length: 226 a.a.
• NCBI ID: WP_060897739.1
• Uniprot ID: A0A250V856
• Organism: Streptomyces sp. RLB1-8
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4676095..4686775

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNV59_RS21460 (FNV59_21780)	-	4678545..4679543 (+)	999	WP_143601634.1	hypothetical protein	-
FNV59_RS21465 (FNV59_21785)	clpX	4679637..4680923 (-)	1287	WP_054231969.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
FNV59_RS21470 (FNV59_21790)	clpP	4681095..4681775 (-)	681	WP_060897739.1	ATP-dependent Clp protease proteolytic subunit	Regulator
FNV59_RS21475 (FNV59_21795)	clpP	4681914..4682519 (-)	606	WP_054231895.1	ATP-dependent Clp protease proteolytic subunit	Regulator
FNV59_RS21480 (FNV59_21800)	tig	4682949..4684355 (-)	1407	WP_060897740.1	trigger factor	-
FNV59_RS53185	-	4685239..4685412 (-)	174	WP_169081042.1	hypothetical protein	-
FNV59_RS21495 (FNV59_21815)	-	4685540..4685857 (-)	318	WP_240362254.1	TMEM175 family protein	-
FNV59_RS21500 (FNV59_21820)	-	4686112..4686306 (-)	195	WP_054231893.1	hypothetical protein	-

Sequence

Protein

• Length: 226 a.a.
• Molecular weight: 24954.42 Da
• Isoelectric Point: 4.6288

>NTDB_id=327636 FNV59_RS21470 WP_060897739.1 4681095..4681775(-) (clpP) [Streptomyces sp. RLB1-8]
MNDFPGSGIYARTQAEYTGPRAESRYVIPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDP
DRDISVYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAILLAAGTPGKRMALPNARVLIHQPYSETGRGQVSD
LEIAANEILRMRAQLEDMLAKHSTTPIEKIREDIERDKILTAEDALAYGLIDQIISTRKMNSSAIV

Nucleotide

• Length: 681 bp

>NTDB_id=327636 FNV59_RS21470 WP_060897739.1 4681095..4681775(-) (clpP) [Streptomyces sp. RLB1-8]
GTGAACGACTTCCCCGGCAGCGGCATCTACGCCCGCACGCAGGCCGAGTACACCGGTCCTCGTGCGGAGTCCCGCTACGT
CATCCCGCGCTTCGTCGAGCGCACCTCGCAGGGCGTGCGTGAGTACGACCCGTACGCGAAGCTGTTCGAGGAGCGCGTGA
TCTTCCTCGGCGTGCAGATCGACGACGCCTCCGCCAACGACGTCATGGCGCAGCTGCTGTGCCTGGAGTCGATGGACCCC
GACCGCGACATCTCGGTCTACATCAACAGCCCCGGTGGCTCGTTTACGGCCCTCACGGCCATTTACGACACGATGCAGTT
CGTGAAGCCCGACATCCAGACGGTCTGCATGGGGCAGGCGGCCTCGGCCGCCGCGATCCTGCTGGCCGCCGGCACGCCGG
GCAAGCGCATGGCGCTTCCGAACGCCCGCGTGCTGATCCACCAGCCCTACAGCGAGACCGGCCGCGGCCAGGTCTCGGAC
CTCGAAATCGCCGCGAACGAGATCCTTCGGATGCGCGCGCAGCTGGAAGACATGCTGGCCAAGCACTCGACCACGCCGAT
CGAGAAGATCCGCGAGGACATCGAGCGCGACAAGATCCTCACCGCTGAGGACGCGCTCGCGTACGGCCTGATCGACCAGA
TCATCTCCACCCGCAAGATGAACAGTTCCGCGATCGTCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (37-217)

3D structure

• AlphaFold DB: A0A250V856

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	52.105	84.071	0.438
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	50	83.186	0.416
clpP	Streptococcus thermophilus LMD-9	46.154	86.283	0.398
clpP	Streptococcus thermophilus LMG 18311	46.154	86.283	0.398
clpP	Streptococcus mutans UA159	45.226	88.053	0.398
clpP	Streptococcus pyogenes MGAS315	45.128	86.283	0.389
clpP	Streptococcus pyogenes JRS4	45.128	86.283	0.389
clpP	Streptococcus pneumoniae D39	44.388	86.726	0.385
clpP	Streptococcus pneumoniae R6	44.388	86.726	0.385
clpP	Streptococcus pneumoniae TIGR4	44.388	86.726	0.385
clpP	Lactococcus lactis subsp. cremoris KW2	44.388	86.726	0.385
clpP	Streptococcus pneumoniae Rx1	44.388	86.726	0.385
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	43.367	86.726	0.376