Detailed information NTG0327635

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: FNV59_RS21465
• Genome accession: NZ_CP041650
• Coordinates: 4679637..4680923 (-)
• Length: 428 a.a.
• NCBI ID: WP_054231969.1
• Uniprot ID: A0ABU3UTX5
• Organism: Streptomyces sp. RLB1-8
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4674637..4685923

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNV59_RS21455 (FNV59_21775)	-	4675784..4678408 (-)	2625	WP_143601633.1	valine--tRNA ligase	-
FNV59_RS21460 (FNV59_21780)	-	4678545..4679543 (+)	999	WP_143601634.1	hypothetical protein	-
FNV59_RS21465 (FNV59_21785)	clpX	4679637..4680923 (-)	1287	WP_054231969.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
FNV59_RS21470 (FNV59_21790)	clpP	4681095..4681775 (-)	681	WP_060897739.1	ATP-dependent Clp protease proteolytic subunit	Regulator
FNV59_RS21475 (FNV59_21795)	clpP	4681914..4682519 (-)	606	WP_054231895.1	ATP-dependent Clp protease proteolytic subunit	Regulator
FNV59_RS21480 (FNV59_21800)	tig	4682949..4684355 (-)	1407	WP_060897740.1	trigger factor	-
FNV59_RS53185	-	4685239..4685412 (-)	174	WP_169081042.1	hypothetical protein	-
FNV59_RS21495 (FNV59_21815)	-	4685540..4685857 (-)	318	WP_240362254.1	TMEM175 family protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46778.62 Da
• Isoelectric Point: 4.8201

>NTDB_id=327635 FNV59_RS21465 WP_054231969.1 4679637..4680923(-) (clpX) [Streptomyces sp. RLB1-8]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
PALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=327635 FNV59_RS21465 WP_054231969.1 4679637..4680923(-) (clpX) [Streptomyces sp. RLB1-8]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAAGAAGAACTCGCGGAAACGA
GCGAGGTCCGCTGGGAGGAGCTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGTCG
GCCAAGAAAGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGTCAGAACCG
GGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACTCTGCTCGCCCAGA
CGCTCGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGTAAGAGCGAAAACCCGTCGATCACGCGAGACGTGTCCGGCGAGGGCGTCCAGCAGGCGC
TGCTCAAGATCCTGGAGGGCACGACCGCCTCCGTTCCGCCGCAGGGCGGACGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCGAGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGCTCGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTGCCCGTCATCACCTCGGTCCACAACCTCGACCGG
CCGGCACTCCTCCAGATCCTCGTGGAGCCGCGCAACGCGCTCGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCGATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGGTTCCCTCGCGCAAGGACGTGGCGAGGGTCGTCATCACG
GCGGACGTCGTCCTGTCCAACGTCAACCCGACGCTGATCCCCCGCGACGCCCGCGGTCGCGGCCCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521