Detailed information NTG0327102

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EG346_RS05540
• Genome accession: NZ_CP033920
• Coordinates: 1193808..1194917 (+)
• Length: 369 a.a.
• NCBI ID: WP_123877247.1
• Uniprot ID: A0A376ELN3
• Organism: Chryseobacterium carnipullorum strain G0188
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1188808..1199917

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EG346_RS05520 (EG346_05555)	sufD	1189120..1190427 (+)	1308	WP_181876136.1	Fe-S cluster assembly protein SufD	-
EG346_RS05525 (EG346_05560)	-	1190499..1191422 (-)	924	WP_123877245.1	DUF3078 domain-containing protein	-
EG346_RS05530 (EG346_05565)	-	1191657..1192583 (-)	927	WP_073328089.1	DUF3078 domain-containing protein	-
EG346_RS05535 (EG346_05570)	-	1192841..1193608 (+)	768	WP_123877246.1	rhomboid family intramembrane serine protease	-
EG346_RS05540 (EG346_05575)	dprA	1193808..1194917 (+)	1110	WP_123877247.1	DNA-processing protein DprA	Machinery gene
EG346_RS05545 (EG346_05580)	gdhA	1195108..1196466 (+)	1359	WP_034739395.1	NADP-specific glutamate dehydrogenase	-
EG346_RS05550 (EG346_05585)	-	1196697..1197011 (-)	315	WP_123877248.1	hypothetical protein	-
EG346_RS05555 (EG346_05590)	-	1197126..1197614 (-)	489	WP_123877249.1	YkgJ family cysteine cluster protein	-
EG346_RS05560 (EG346_05595)	-	1197615..1198586 (-)	972	WP_123877250.1	ion channel	-
EG346_RS05565 (EG346_05600)	-	1198953..1199753 (-)	801	WP_123877251.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41348.09 Da
• Isoelectric Point: 6.3121

>NTDB_id=327102 EG346_RS05540 WP_123877247.1 1193808..1194917(+) (dprA) [Chryseobacterium carnipullorum strain G0188]
MISEEHLYAIALRECSLIGDINFHKLIRTFGTAEEVWKRAKKEYTKTDGIGRKTVSDIGNEDYLKFAEKEIQFCEKNNIR
ILLRYFNELPHLLNECDDSPAILYQKGNFDDSLQKISIVGTRNMTSYGQQFIWDFLEAASSSKCISVSGLALGVDKEVHE
QSIHYKIPTVAVLAHGFHMLYPSKNKKLSEKILEEGGALFTEFNSSRKPDRENFIQRNRIIAGMSPSTIVVETGFGGGSV
STAAFANDYNREVFALPGKITDPYSQGCNQLIFQNKAAAISTVKDLVDSLGFNHSKEKVAELFPYSEISIQLTENQESIY
QSIKANPQVSLDDLAQMVSVPSYKILPVILELELLGKVKSFSGRQFSAI

Nucleotide

• Length: 1110 bp

>NTDB_id=327102 EG346_RS05540 WP_123877247.1 1193808..1194917(+) (dprA) [Chryseobacterium carnipullorum strain G0188]
ATGATCTCCGAAGAACATCTTTATGCCATCGCTTTGCGCGAATGCAGCCTGATTGGCGACATTAATTTTCATAAGCTAAT
AAGAACCTTTGGAACTGCGGAGGAAGTCTGGAAAAGGGCAAAAAAAGAATATACTAAAACAGATGGTATCGGCAGAAAAA
CAGTTTCTGATATCGGAAATGAAGACTATTTGAAATTTGCCGAAAAAGAAATACAGTTCTGTGAAAAAAACAATATTAGG
ATTTTGCTTCGATACTTTAATGAGCTCCCTCATCTGCTCAACGAATGTGATGACTCCCCTGCAATTCTCTATCAAAAAGG
AAATTTTGACGATTCATTACAAAAAATCAGCATTGTAGGAACCCGAAATATGACTTCCTATGGCCAACAGTTTATCTGGG
ATTTCTTAGAAGCTGCTTCATCCTCCAAATGCATATCAGTGAGCGGATTAGCTCTTGGCGTAGATAAGGAGGTTCATGAA
CAATCTATTCACTATAAAATACCGACCGTCGCCGTGCTGGCTCATGGTTTCCATATGCTGTATCCTTCCAAAAATAAAAA
GCTCTCCGAAAAGATTCTGGAAGAAGGCGGCGCTCTGTTCACCGAATTCAATTCATCCAGAAAGCCCGACCGCGAAAATT
TCATTCAAAGAAACAGAATTATAGCTGGAATGTCTCCCTCAACCATCGTTGTTGAGACCGGATTTGGAGGTGGATCTGTA
AGCACGGCAGCTTTTGCCAATGATTATAACCGCGAAGTTTTTGCATTGCCGGGTAAGATCACAGATCCTTACAGTCAGGG
GTGTAATCAATTGATTTTTCAGAATAAAGCAGCAGCTATTTCTACTGTAAAAGATCTTGTGGATTCATTGGGATTCAATC
ATTCAAAAGAGAAAGTAGCCGAGTTGTTCCCTTACAGTGAAATAAGTATACAACTTACTGAAAATCAAGAATCCATTTAT
CAGTCGATCAAAGCCAATCCTCAGGTGTCTCTGGATGATCTGGCGCAGATGGTTTCAGTGCCTTCTTATAAAATTCTTCC
TGTAATCTTGGAATTAGAGCTTTTGGGGAAAGTAAAATCATTTTCCGGGAGGCAATTTAGTGCAATTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

• DprA winged helix domain (DprA_WH) (310-363)

3D structure

• AlphaFold DB: A0A376ELN3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	53.406	99.458	0.531