Detailed information NTG0327101

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: FNV66_RS21050
• Genome accession: NZ_CP041607
• Coordinates: 4298599..4299885 (-)
• Length: 428 a.a.
• NCBI ID: WP_054231969.1
• Uniprot ID: A0ABU3UTX5
• Organism: Streptomyces sp. S1D4-14
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4293599..4304885

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNV66_RS21040 (FNV66_21280)	-	4294746..4297370 (-)	2625	WP_143601633.1	valine--tRNA ligase	-
FNV66_RS21045 (FNV66_21285)	-	4297507..4298505 (+)	999	WP_143601634.1	hypothetical protein	-
FNV66_RS21050 (FNV66_21290)	clpX	4298599..4299885 (-)	1287	WP_054231969.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
FNV66_RS21055 (FNV66_21295)	clpP	4300057..4300737 (-)	681	WP_060897739.1	ATP-dependent Clp protease proteolytic subunit	Regulator
FNV66_RS21060 (FNV66_21300)	clpP	4300876..4301481 (-)	606	WP_054231895.1	ATP-dependent Clp protease proteolytic subunit	Regulator
FNV66_RS21065 (FNV66_21305)	tig	4301911..4303317 (-)	1407	WP_060897740.1	trigger factor	-
FNV66_RS21080	-	4304201..4304374 (-)	174	WP_169081042.1	hypothetical protein	-
FNV66_RS21085 (FNV66_21320)	-	4304502..4304819 (-)	318	WP_240362254.1	TMEM175 family protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46778.62 Da
• Isoelectric Point: 4.8201

>NTDB_id=327101 FNV66_RS21050 WP_054231969.1 4298599..4299885(-) (clpX) [Streptomyces sp. S1D4-14]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
PALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=327101 FNV66_RS21050 WP_054231969.1 4298599..4299885(-) (clpX) [Streptomyces sp. S1D4-14]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAAGAAGAACTCGCGGAAACGA
GCGAGGTCCGCTGGGAGGAGCTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGTCG
GCCAAGAAAGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGTCAGAACCG
GGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACTCTGCTCGCCCAGA
CGCTCGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGTAAGAGCGAAAACCCGTCGATCACGCGAGACGTGTCCGGCGAGGGCGTCCAGCAGGCGC
TGCTCAAGATCCTGGAGGGCACGACCGCCTCCGTTCCGCCGCAGGGCGGACGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCGAGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGCTCGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTGCCCGTCATCACCTCGGTCCACAACCTCGACCGG
CCGGCACTCCTCCAGATCCTCGTGGAGCCGCGCAACGCGCTCGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCGATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGGTTCCCTCGCGCAAGGACGTGGCGAGGGTCGTCATCACG
GCGGACGTCGTCCTGTCCAACGTCAACCCGACGCTGATCCCCCGCGACGCCCGCGGTCGCGGCCCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521