Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FIM01_RS01720 | Genome accession | NZ_CP041035 |
| Coordinates | 368541..369014 (+) | Length | 157 a.a. |
| NCBI ID | WP_000993729.1 | Uniprot ID | A0A0D5YCX7 |
| Organism | Acinetobacter baumannii strain 11W359501 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 363541..374014
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIM01_RS01700 (FIM01_01700) | - | 364929..365816 (+) | 888 | WP_001017320.1 | metal-dependent hydrolase | - |
| FIM01_RS01705 (FIM01_01705) | - | 365947..366537 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| FIM01_RS01710 (FIM01_01710) | - | 366559..367641 (+) | 1083 | WP_001246387.1 | TPM domain-containing protein | - |
| FIM01_RS01715 (FIM01_01715) | - | 367635..368195 (+) | 561 | WP_000258946.1 | TPM domain-containing protein | - |
| FIM01_RS01720 (FIM01_01720) | pilA | 368541..369014 (+) | 474 | WP_000993729.1 | pilin | Machinery gene |
| FIM01_RS01725 (FIM01_01725) | - | 369259..370887 (+) | 1629 | WP_001195775.1 | PglL family O-oligosaccharyltransferase | - |
| FIM01_RS01730 (FIM01_01730) | bfr | 370930..371394 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| FIM01_RS01735 (FIM01_01735) | - | 371639..371833 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| FIM01_RS01740 (FIM01_01740) | - | 372043..372426 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 15793.78 Da Isoelectric Point: 4.4982
>NTDB_id=324559 FIM01_RS01720 WP_000993729.1 368541..369014(+) (pilA) [Acinetobacter baumannii strain 11W359501]
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQTYIAKSQVSRAVSESGSLKTVIEDCLNNGKTTVGEAAGECAIGATGSNI
LDGAAQSGETLAAGTGVPQVTLANTGAATIVATFGNSASTALKSTPTTVTWTRTTDGTWTCESTAAEKYNSSACPAA
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQTYIAKSQVSRAVSESGSLKTVIEDCLNNGKTTVGEAAGECAIGATGSNI
LDGAAQSGETLAAGTGVPQVTLANTGAATIVATFGNSASTALKSTPTTVTWTRTTDGTWTCESTAAEKYNSSACPAA
Nucleotide
Download Length: 474 bp
>NTDB_id=324559 FIM01_RS01720 WP_000993729.1 368541..369014(+) (pilA) [Acinetobacter baumannii strain 11W359501]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTAGTTGCCATTATTGGTATTTTGGCTGCAATTGCGAT
TCCGCAATATCAAACTTATATTGCCAAATCGCAAGTATCACGTGCGGTTAGTGAATCAGGTTCCTTAAAAACTGTAATTG
AAGACTGTTTAAATAATGGTAAAACTACAGTTGGTGAAGCTGCTGGTGAATGTGCTATTGGGGCAACGGGTTCAAATATT
TTAGATGGGGCTGCACAAAGTGGTGAAACTTTAGCTGCTGGAACTGGGGTTCCACAAGTTACATTAGCAAATACAGGCGC
TGCGACAATTGTTGCAACTTTTGGTAATTCTGCTTCTACTGCATTAAAATCTACACCAACTACAGTAACTTGGACTCGTA
CAACAGATGGCACTTGGACATGTGAAAGTACTGCTGCCGAAAAATATAATAGTTCTGCTTGCCCTGCAGCATAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTAGTTGCCATTATTGGTATTTTGGCTGCAATTGCGAT
TCCGCAATATCAAACTTATATTGCCAAATCGCAAGTATCACGTGCGGTTAGTGAATCAGGTTCCTTAAAAACTGTAATTG
AAGACTGTTTAAATAATGGTAAAACTACAGTTGGTGAAGCTGCTGGTGAATGTGCTATTGGGGCAACGGGTTCAAATATT
TTAGATGGGGCTGCACAAAGTGGTGAAACTTTAGCTGCTGGAACTGGGGTTCCACAAGTTACATTAGCAAATACAGGCGC
TGCGACAATTGTTGCAACTTTTGGTAATTCTGCTTCTACTGCATTAAAATCTACACCAACTACAGTAACTTGGACTCGTA
CAACAGATGGCACTTGGACATGTGAAAGTACTGCTGCCGAAAAATATAATAGTTCTGCTTGCCCTGCAGCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
44.099 |
100 |
0.452 |
| pilA | Pseudomonas aeruginosa PAK |
42.581 |
98.726 |
0.42 |
| comP | Acinetobacter baylyi ADP1 |
39.873 |
100 |
0.401 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
41.176 |
97.452 |
0.401 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
37.58 |
100 |
0.376 |
| pilA | Vibrio cholerae strain A1552 |
37.58 |
100 |
0.376 |
| pilA | Vibrio cholerae C6706 |
37.58 |
100 |
0.376 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.562 |
97.452 |
0.376 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
37.179 |
99.363 |
0.369 |