Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ECB94_RS13650 | Genome accession | NZ_CP033577 |
| Coordinates | 2846137..2846430 (+) | Length | 97 a.a. |
| NCBI ID | WP_124940765.1 | Uniprot ID | A0A3G4VBS8 |
| Organism | Vibrio mediterranei strain 117-T6 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2841137..2851430
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECB94_RS13640 (ECB94_13660) | - | 2843648..2843920 (+) | 273 | WP_006075676.1 | HU family DNA-binding protein | - |
| ECB94_RS13645 (ECB94_13665) | ppiD | 2844106..2845965 (+) | 1860 | WP_124940764.1 | peptidylprolyl isomerase | - |
| ECB94_RS13650 (ECB94_13670) | comEA | 2846137..2846430 (+) | 294 | WP_124940765.1 | ComEA family DNA-binding protein | Machinery gene |
| ECB94_RS13655 (ECB94_13675) | rrtA | 2846413..2846976 (-) | 564 | WP_124940766.1 | rhombosortase | - |
| ECB94_RS13660 (ECB94_13680) | - | 2846975..2847595 (+) | 621 | WP_124941228.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| ECB94_RS13665 (ECB94_13685) | - | 2847616..2848946 (-) | 1331 | Protein_2599 | anti-phage deoxyguanosine triphosphatase | - |
| ECB94_RS13670 (ECB94_13690) | yfbR | 2848965..2849549 (-) | 585 | WP_006075259.1 | 5'-deoxynucleotidase | - |
| ECB94_RS13675 (ECB94_13695) | - | 2849633..2850847 (-) | 1215 | WP_006075260.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 97 a.a. Molecular weight: 10732.33 Da Isoelectric Point: 5.1881
>NTDB_id=324126 ECB94_RS13650 WP_124940765.1 2846137..2846430(+) (comEA) [Vibrio mediterranei strain 117-T6]
MKYLKNVWLLVVLLVAPVSFSYASEAKKLEGIEITVNINQAGPEELAELLKGVGEEKAKDIVEYRDQHGSFKSADDLTQV
KGIGEATVEKNRSRITL
MKYLKNVWLLVVLLVAPVSFSYASEAKKLEGIEITVNINQAGPEELAELLKGVGEEKAKDIVEYRDQHGSFKSADDLTQV
KGIGEATVEKNRSRITL
Nucleotide
Download Length: 294 bp
>NTDB_id=324126 ECB94_RS13650 WP_124940765.1 2846137..2846430(+) (comEA) [Vibrio mediterranei strain 117-T6]
ATGAAGTATCTAAAAAACGTTTGGCTGCTAGTAGTTTTGTTAGTTGCCCCAGTGAGCTTTTCCTATGCATCTGAAGCGAA
GAAATTAGAGGGGATAGAGATAACAGTCAATATCAACCAAGCGGGCCCTGAGGAACTAGCGGAACTGCTCAAAGGTGTTG
GCGAGGAAAAAGCAAAAGATATTGTGGAGTATCGCGATCAACACGGAAGTTTTAAATCGGCAGATGATTTAACTCAAGTG
AAAGGTATTGGTGAAGCAACGGTAGAGAAGAACCGTTCAAGAATCACTTTGTAA
ATGAAGTATCTAAAAAACGTTTGGCTGCTAGTAGTTTTGTTAGTTGCCCCAGTGAGCTTTTCCTATGCATCTGAAGCGAA
GAAATTAGAGGGGATAGAGATAACAGTCAATATCAACCAAGCGGGCCCTGAGGAACTAGCGGAACTGCTCAAAGGTGTTG
GCGAGGAAAAAGCAAAAGATATTGTGGAGTATCGCGATCAACACGGAAGTTTTAAATCGGCAGATGATTTAACTCAAGTG
AAAGGTATTGGTGAAGCAACGGTAGAGAAGAACCGTTCAAGAATCACTTTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
59.783 |
94.845 |
0.567 |
| comEA | Vibrio campbellii strain DS40M4 |
59.14 |
95.876 |
0.567 |
| comEA | Vibrio cholerae C6706 |
61.333 |
77.32 |
0.474 |
| comEA | Vibrio cholerae strain A1552 |
61.333 |
77.32 |
0.474 |
| comE | Neisseria gonorrhoeae MS11 |
44.944 |
91.753 |
0.412 |
| comE | Neisseria gonorrhoeae MS11 |
44.944 |
91.753 |
0.412 |
| comE | Neisseria gonorrhoeae MS11 |
44.944 |
91.753 |
0.412 |
| comE | Neisseria gonorrhoeae MS11 |
44.944 |
91.753 |
0.412 |
| comEA | Acinetobacter baylyi ADP1 |
47.619 |
86.598 |
0.412 |
| comEA | Acinetobacter baumannii strain A118 |
48.649 |
76.289 |
0.371 |
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
40.909 |
90.722 |
0.371 |