Detailed information
Bioinformatically predicted
Overview
| Name | cinA | Type | Machinery gene |
| Locus tag | D9842_RS04515 | Genome accession | NZ_CP033043 |
| Coordinates | 959048..960298 (+) | Length | 416 a.a. |
| NCBI ID | WP_121661469.1 | Uniprot ID | - |
| Organism | Metabacillus litoralis strain Bac94 | ||
| Function | unknown (predicted from homology) Unclear |
||
Genomic Context
Location: 954048..965298
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9842_RS04485 | yfmH | 954051..955340 (+) | 1290 | WP_121661464.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| D9842_RS04490 | ymfI | 955456..956172 (+) | 717 | WP_121661465.1 | elongation factor P 5-aminopentanone reductase | - |
| D9842_RS04495 | - | 956246..956503 (+) | 258 | WP_121661466.1 | DUF3243 domain-containing protein | - |
| D9842_RS04500 | - | 956656..957447 (+) | 792 | WP_098796361.1 | DUF3388 domain-containing protein | - |
| D9842_RS04505 | - | 957464..958336 (+) | 873 | WP_162987291.1 | helix-turn-helix domain-containing protein | - |
| D9842_RS04510 | pgsA | 958457..959035 (+) | 579 | WP_121661468.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| D9842_RS04515 | cinA | 959048..960298 (+) | 1251 | WP_121661469.1 | competence/damage-inducible protein A | Machinery gene |
| D9842_RS04520 | recA | 960598..961638 (+) | 1041 | WP_121661470.1 | recombinase RecA | Machinery gene |
| D9842_RS04525 | ltrA | 962204..963460 (+) | 1257 | WP_121664937.1 | group II intron reverse transcriptase/maturase | - |
Sequence
Protein
Download Length: 416 a.a. Molecular weight: 46333.96 Da Isoelectric Point: 5.2459
>NTDB_id=320598 D9842_RS04515 WP_121661469.1 959048..960298(+) (cinA) [Metabacillus litoralis strain Bac94]
MNIRTEIIAVGSELLLGQIVNSNAQFLSQELAELGLSVYYHTVVGDNPSRLESAINIAKERSNVIIFTGGLGPTKDDLTK
ETISKVLGRELTFDVEALESIERYFTQTKRIMSENNKKQALVIDGSYILKNDYGMAPGMAVDIDGMIYMLLPGPPSEMKP
MFENYGKEYFQTKLGFQDKIISRVLRYFGIGESQLETDIHDIIDEQTNPTIAPLAADGEVTLRLTAKHKDEHIAQKLLDQ
TEKRINDRVGEFFYGYEQTTLVHELNKLLMKKGKTISAAESLTGGMFSEYMTSLDGASQIFKGSIVSYTNEVKEQILKVQ
KRTLEQFGAVSEECAREMAEQIRKLSKSDIGISFTGAAGPEPHEGQPVGTVFIAISMGDQESNVFKLNLAGSRKGIRVRS
VKYGCHYLVKLLNEIE
MNIRTEIIAVGSELLLGQIVNSNAQFLSQELAELGLSVYYHTVVGDNPSRLESAINIAKERSNVIIFTGGLGPTKDDLTK
ETISKVLGRELTFDVEALESIERYFTQTKRIMSENNKKQALVIDGSYILKNDYGMAPGMAVDIDGMIYMLLPGPPSEMKP
MFENYGKEYFQTKLGFQDKIISRVLRYFGIGESQLETDIHDIIDEQTNPTIAPLAADGEVTLRLTAKHKDEHIAQKLLDQ
TEKRINDRVGEFFYGYEQTTLVHELNKLLMKKGKTISAAESLTGGMFSEYMTSLDGASQIFKGSIVSYTNEVKEQILKVQ
KRTLEQFGAVSEECAREMAEQIRKLSKSDIGISFTGAAGPEPHEGQPVGTVFIAISMGDQESNVFKLNLAGSRKGIRVRS
VKYGCHYLVKLLNEIE
Nucleotide
Download Length: 1251 bp
>NTDB_id=320598 D9842_RS04515 WP_121661469.1 959048..960298(+) (cinA) [Metabacillus litoralis strain Bac94]
ATGAATATAAGAACAGAGATTATCGCCGTTGGTTCGGAGTTGCTTTTAGGTCAAATAGTAAACTCTAACGCTCAATTTTT
ATCACAAGAGTTAGCTGAACTTGGCTTGAGTGTATATTATCATACCGTAGTAGGAGATAACCCTTCCCGTCTAGAATCAG
CAATTAACATTGCAAAGGAACGTTCTAATGTTATCATTTTTACTGGAGGCCTCGGTCCGACTAAGGATGATTTAACAAAA
GAAACAATTTCAAAAGTGTTAGGAAGAGAGCTAACGTTTGATGTGGAAGCTTTAGAAAGTATCGAACGTTATTTTACTCA
AACAAAACGTATCATGTCTGAAAATAATAAAAAACAAGCATTGGTTATTGATGGCTCCTACATTTTAAAAAATGACTATG
GTATGGCTCCTGGAATGGCTGTTGATATTGACGGAATGATTTATATGCTATTGCCAGGCCCACCTAGTGAAATGAAGCCA
ATGTTTGAGAATTATGGAAAAGAATATTTCCAAACAAAACTAGGTTTTCAAGATAAAATTATTTCACGTGTTTTAAGATA
TTTTGGAATTGGTGAATCCCAGCTTGAAACAGATATACATGATATTATTGATGAACAAACAAATCCGACAATTGCTCCTC
TGGCAGCGGATGGAGAAGTAACATTAAGACTTACAGCGAAGCATAAGGATGAACATATTGCACAAAAACTCCTTGATCAA
ACAGAGAAAAGAATTAATGACCGTGTAGGTGAGTTTTTCTATGGTTATGAACAGACAACCCTTGTTCATGAATTAAATAA
ACTTTTGATGAAAAAAGGGAAAACAATTTCTGCAGCTGAAAGTTTAACAGGTGGAATGTTTTCAGAGTACATGACATCTT
TAGATGGTGCTTCCCAAATTTTTAAAGGTAGTATTGTTTCTTATACAAATGAAGTGAAAGAGCAAATATTGAAGGTGCAA
AAACGTACCCTTGAACAATTTGGTGCAGTTAGCGAGGAATGTGCAAGGGAAATGGCTGAGCAAATCCGAAAGCTCTCTAA
AAGTGATATAGGCATTAGTTTTACAGGTGCTGCAGGACCAGAACCACATGAGGGGCAGCCTGTAGGGACAGTTTTTATTG
CCATTTCTATGGGTGATCAGGAATCCAATGTTTTTAAACTGAATCTAGCTGGATCTAGAAAGGGAATTCGTGTTCGCTCG
GTAAAGTATGGATGTCATTATTTAGTCAAACTATTAAACGAAATTGAATGA
ATGAATATAAGAACAGAGATTATCGCCGTTGGTTCGGAGTTGCTTTTAGGTCAAATAGTAAACTCTAACGCTCAATTTTT
ATCACAAGAGTTAGCTGAACTTGGCTTGAGTGTATATTATCATACCGTAGTAGGAGATAACCCTTCCCGTCTAGAATCAG
CAATTAACATTGCAAAGGAACGTTCTAATGTTATCATTTTTACTGGAGGCCTCGGTCCGACTAAGGATGATTTAACAAAA
GAAACAATTTCAAAAGTGTTAGGAAGAGAGCTAACGTTTGATGTGGAAGCTTTAGAAAGTATCGAACGTTATTTTACTCA
AACAAAACGTATCATGTCTGAAAATAATAAAAAACAAGCATTGGTTATTGATGGCTCCTACATTTTAAAAAATGACTATG
GTATGGCTCCTGGAATGGCTGTTGATATTGACGGAATGATTTATATGCTATTGCCAGGCCCACCTAGTGAAATGAAGCCA
ATGTTTGAGAATTATGGAAAAGAATATTTCCAAACAAAACTAGGTTTTCAAGATAAAATTATTTCACGTGTTTTAAGATA
TTTTGGAATTGGTGAATCCCAGCTTGAAACAGATATACATGATATTATTGATGAACAAACAAATCCGACAATTGCTCCTC
TGGCAGCGGATGGAGAAGTAACATTAAGACTTACAGCGAAGCATAAGGATGAACATATTGCACAAAAACTCCTTGATCAA
ACAGAGAAAAGAATTAATGACCGTGTAGGTGAGTTTTTCTATGGTTATGAACAGACAACCCTTGTTCATGAATTAAATAA
ACTTTTGATGAAAAAAGGGAAAACAATTTCTGCAGCTGAAAGTTTAACAGGTGGAATGTTTTCAGAGTACATGACATCTT
TAGATGGTGCTTCCCAAATTTTTAAAGGTAGTATTGTTTCTTATACAAATGAAGTGAAAGAGCAAATATTGAAGGTGCAA
AAACGTACCCTTGAACAATTTGGTGCAGTTAGCGAGGAATGTGCAAGGGAAATGGCTGAGCAAATCCGAAAGCTCTCTAA
AAGTGATATAGGCATTAGTTTTACAGGTGCTGCAGGACCAGAACCACATGAGGGGCAGCCTGTAGGGACAGTTTTTATTG
CCATTTCTATGGGTGATCAGGAATCCAATGTTTTTAAACTGAATCTAGCTGGATCTAGAAAGGGAATTCGTGTTCGCTCG
GTAAAGTATGGATGTCATTATTTAGTCAAACTATTAAACGAAATTGAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cinA | Bacillus subtilis subsp. subtilis str. 168 |
62.53 |
98.798 |
0.618 |
| cinA | Streptococcus pneumoniae TIGR4 |
47.381 |
100 |
0.478 |
| cinA | Streptococcus mitis SK321 |
47.143 |
100 |
0.476 |
| cinA | Streptococcus mitis NCTC 12261 |
46.905 |
100 |
0.474 |
| cinA | Streptococcus pneumoniae Rx1 |
46.667 |
100 |
0.471 |
| cinA | Streptococcus pneumoniae R6 |
46.667 |
100 |
0.471 |
| cinA | Streptococcus mutans UA159 |
47.229 |
99.76 |
0.471 |
| cinA | Streptococcus pneumoniae D39 |
46.429 |
100 |
0.469 |
| cinA | Streptococcus suis isolate S10 |
40.212 |
90.865 |
0.365 |