Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   AFLV_RS08085 Genome accession   NC_011567
Coordinates   1534357..1535589 (-) Length   410 a.a.
NCBI ID   WP_012575122.1    Uniprot ID   B7GJN4
Organism   Anoxybacillus flavithermus WK1     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1529357..1540589
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AFLV_RS08065 (Aflv_1527) spoVS 1530164..1530424 (-) 261 WP_003181955.1 stage V sporulation protein SpoVS -
  AFLV_RS08070 (Aflv_1528) - 1530554..1531348 (-) 795 WP_041638419.1 TIGR00282 family metallophosphoesterase -
  AFLV_RS08075 (Aflv_1529) rny 1531446..1533002 (-) 1557 WP_041638421.1 ribonuclease Y -
  AFLV_RS08080 (Aflv_1530) recA 1533212..1534249 (-) 1038 WP_041638422.1 recombinase RecA Machinery gene
  AFLV_RS08085 (Aflv_1531) cinA 1534357..1535589 (-) 1233 WP_012575122.1 competence/damage-inducible protein A Machinery gene
  AFLV_RS08090 (Aflv_1532) pgsA 1535612..1536190 (-) 579 WP_041638424.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  AFLV_RS08095 (Aflv_1533) - 1536220..1537080 (-) 861 WP_012575124.1 RodZ domain-containing protein -
  AFLV_RS08100 (Aflv_1534) - 1537090..1537881 (-) 792 WP_006323425.1 DUF3388 domain-containing protein -
  AFLV_RS08105 (Aflv_1535) - 1538065..1538313 (-) 249 WP_006323424.1 DUF3243 domain-containing protein -
  AFLV_RS08110 (Aflv_1536) - 1538379..1539092 (-) 714 WP_012575126.1 SDR family oxidoreductase -
  AFLV_RS08115 (Aflv_1537) - 1539099..1540379 (-) 1281 WP_012575127.1 pitrilysin family protein -

Sequence

Protein


Download         Length: 410 a.a.        Molecular weight: 45597.57 Da        Isoelectric Point: 6.6616

>NTDB_id=31842 AFLV_RS08085 WP_012575122.1 1534357..1535589(-) (cinA) [Anoxybacillus flavithermus WK1]
MKAEIIAVGSELLLGQIANTNAQFLSQQLAEIGIDVYYHTVVGDNPQRLTHAIEVAKQRSNLIIFTGGLGPTKDDLTKET
IAKMLNKSLVLDEEAWQSICDYFSKTNRPMSPNNRKQALVLEGSHVLKNEHGMAPGMALVVDQVTYMLLPGPPKEMQPMF
MKYGRPFLLQKRHVREKIVSRVLRFFHIGESQLETEIEDLIDAQTNPTIAPLASDGEVTLRLTAKHEREEEAKRLIDEVE
ENILARVRPYFYGYNDETLFSKLLATLKEKHKTLAVAESLTGGLFLKEMTALPTASSVIAGGVVCYTNEIKENVLHVPKE
ILQTEGAVSERCAQSLAENVRKLCRSDIGISFTGVAGPDDLEGKPVGTVWIGIATERGTKTFALTLSGDRQAIRMRTAKY
GCYYLLQLLH

Nucleotide


Download         Length: 1233 bp        

>NTDB_id=31842 AFLV_RS08085 WP_012575122.1 1534357..1535589(-) (cinA) [Anoxybacillus flavithermus WK1]
ATGAAGGCAGAAATTATCGCCGTTGGCTCGGAGCTTTTACTTGGCCAAATTGCAAATACAAATGCTCAATTTTTATCTCA
ACAATTAGCTGAAATAGGGATAGATGTATATTACCATACGGTTGTTGGAGATAATCCTCAAAGGCTTACACATGCGATTG
AAGTAGCAAAGCAACGCTCGAATTTGATTATTTTTACGGGGGGACTTGGACCGACGAAAGATGATTTAACAAAAGAAACG
ATTGCAAAGATGTTAAATAAATCGCTCGTTTTAGACGAAGAAGCATGGCAATCCATTTGTGATTATTTTTCAAAAACAAA
TCGTCCGATGTCCCCAAACAATCGAAAACAGGCGCTTGTGTTAGAAGGAAGTCACGTGTTAAAAAATGAACATGGGATGG
CTCCTGGAATGGCACTTGTTGTTGATCAGGTGACGTATATGCTTCTTCCGGGGCCGCCAAAAGAAATGCAACCGATGTTC
ATGAAATATGGACGTCCTTTTTTATTGCAAAAACGTCACGTCCGCGAAAAAATTGTTTCACGTGTTCTTCGCTTCTTTCA
TATCGGGGAATCACAGCTAGAAACAGAAATTGAAGATTTGATCGATGCGCAAACGAATCCAACGATTGCTCCACTTGCGT
CTGACGGTGAAGTGACTCTCCGCTTGACAGCAAAGCATGAACGTGAAGAAGAAGCGAAGCGGCTGATTGACGAGGTAGAG
GAAAATATTTTAGCGCGTGTTCGCCCTTATTTTTACGGTTACAATGATGAAACGTTGTTTAGCAAACTGTTAGCTACGTT
AAAAGAAAAGCATAAGACACTTGCTGTTGCTGAAAGCTTAACGGGGGGGTTGTTTTTAAAGGAAATGACTGCTCTTCCGA
CAGCTTCTTCTGTCATAGCAGGAGGGGTTGTATGTTATACAAATGAAATAAAGGAAAATGTGCTTCATGTGCCGAAAGAA
ATATTACAAACAGAGGGGGCAGTGAGCGAACGATGTGCACAATCGTTGGCGGAAAATGTTCGAAAACTTTGTCGAAGTGA
TATCGGTATAAGCTTTACAGGCGTCGCAGGACCGGACGATTTGGAAGGGAAGCCAGTAGGAACAGTATGGATAGGGATTG
CCACAGAACGAGGGACAAAAACGTTTGCACTTACATTATCCGGTGATCGTCAAGCTATTCGGATGCGTACTGCAAAATAT
GGTTGTTATTATTTACTACAATTGTTGCATTGA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(258-408)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB B7GJN4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

62.5

99.512

0.622
  cinA Streptococcus mitis SK321

51.613

98.293

0.507
  cinA Streptococcus mitis NCTC 12261

51.365

98.293

0.505
  cinA Streptococcus pneumoniae TIGR4

50.873

97.805

0.498
  cinA Streptococcus pneumoniae Rx1

50.623

97.805

0.495
  cinA Streptococcus pneumoniae R6

50.623

97.805

0.495
  cinA Streptococcus pneumoniae D39

50.374

97.805

0.493
  cinA Streptococcus mutans UA159

48.379

97.805

0.473
  cinA Streptococcus suis isolate S10

41.99

100

0.422

Multiple sequence alignment