Detailed information NTG0317217

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: D7D53_RS08330
• Genome accession: NZ_CP032621
• Coordinates: 1648582..1648986 (-)
• Length: 134 a.a.
• NCBI ID: WP_245941793.1
• Uniprot ID: -
• Organism: Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1643582..1653986

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D7D53_RS08295 (D7D53_08295)	rnpA	1644119..1644490 (-)	372	WP_000739243.1	ribonuclease P protein component	-
D7D53_RS08300 (D7D53_08300)	-	1644639..1645829 (-)	1191	WP_120770669.1	acetate kinase	-
D7D53_RS08305 (D7D53_08305)	comYH	1645880..1646833 (-)	954	WP_120770670.1	class I SAM-dependent methyltransferase	Machinery gene
D7D53_RS08310 (D7D53_08310)	-	1646894..1647481 (-)	588	WP_162927893.1	class I SAM-dependent methyltransferase	-
D7D53_RS08315 (D7D53_08315)	comGG/cglG	1647514..1647915 (-)	402	WP_120770671.1	competence type IV pilus minor pilin ComGG	Machinery gene
D7D53_RS08320 (D7D53_08320)	comGF/cglF	1647893..1648354 (-)	462	WP_000250521.1	competence type IV pilus minor pilin ComGF	Machinery gene
D7D53_RS08325 (D7D53_08325)	comGE/cglE	1648317..1648619 (-)	303	WP_281268606.1	competence type IV pilus minor pilin ComGE	Machinery gene
D7D53_RS08330 (D7D53_08330)	comGD/cglD	1648582..1648986 (-)	405	WP_245941793.1	competence type IV pilus minor pilin ComGD	Machinery gene
D7D53_RS08335 (D7D53_08335)	comGC/cglC	1648979..1649305 (-)	327	WP_045606658.1	competence type IV pilus major pilin ComGC	Machinery gene
D7D53_RS08340 (D7D53_08340)	comGB/cglB	1649307..1650323 (-)	1017	WP_120770673.1	competence type IV pilus assembly protein ComGB	Machinery gene
D7D53_RS08345 (D7D53_08345)	comGA/cglA/cilD	1650271..1651212 (-)	942	WP_120770674.1	competence type IV pilus ATPase ComGA	Machinery gene
D7D53_RS08350 (D7D53_08350)	-	1651288..1651653 (-)	366	WP_120770675.1	DUF1033 family protein	-
D7D53_RS08355 (D7D53_08355)	-	1651805..1652863 (-)	1059	WP_120770676.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14673.87 Da
• Isoelectric Point: 10.2164

>NTDB_id=317217 D7D53_RS08330 WP_245941793.1 1648582..1648986(-) (comGD/cglD) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
MIKAFTMFESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLSIDGQTISNGSQKLTV
PKGIQAPSGQSITFDRVGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=317217 D7D53_RS08330 WP_245941793.1 1648582..1648986(-) (comGD/cglD) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
ATGATTAAGGCCTTTACCATGTTTGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTAGGCTTGTCCGGTTC
TGTCCAGTCCACTTTTGCGGCGGTAGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTTTATCGGGAAACTCAAAAAC
GCAGTGTAGCTAGTCAGCAAAAGACAAGTTTGAGCATAGACGGACAGACCATTAGTAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCGGGCCAAAGTATTACATTTGACCGAGTTGGAGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGTTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae Rx1	95.522	100	0.955
comGD/cglD	Streptococcus pneumoniae R6	95.522	100	0.955
comGD/cglD	Streptococcus pneumoniae D39	95.522	100	0.955
comGD/cglD	Streptococcus mitis NCTC 12261	95.489	99.254	0.948
comGD/cglD	Streptococcus mitis SK321	94.776	100	0.948
comGD/cglD	Streptococcus pneumoniae TIGR4	94.776	100	0.948
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	48.438	95.522	0.463
comYD	Streptococcus mutans UA159	48.438	95.522	0.463