Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG/cglG   Type   Machinery gene
Locus tag   D7D53_RS08315 Genome accession   NZ_CP032621
Coordinates   1647514..1647915 (-) Length   133 a.a.
NCBI ID   WP_120770671.1    Uniprot ID   A0A387B1Z1
Organism   Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1642514..1652915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D53_RS08290 (D7D53_08290) - 1643320..1644144 (-) 825 WP_218961675.1 membrane protein insertase YidC -
  D7D53_RS08295 (D7D53_08295) rnpA 1644119..1644490 (-) 372 WP_000739243.1 ribonuclease P protein component -
  D7D53_RS08300 (D7D53_08300) - 1644639..1645829 (-) 1191 WP_120770669.1 acetate kinase -
  D7D53_RS08305 (D7D53_08305) comYH 1645880..1646833 (-) 954 WP_120770670.1 class I SAM-dependent methyltransferase Machinery gene
  D7D53_RS08310 (D7D53_08310) - 1646894..1647481 (-) 588 WP_162927893.1 class I SAM-dependent methyltransferase -
  D7D53_RS08315 (D7D53_08315) comGG/cglG 1647514..1647915 (-) 402 WP_120770671.1 competence type IV pilus minor pilin ComGG Machinery gene
  D7D53_RS08320 (D7D53_08320) comGF/cglF 1647893..1648354 (-) 462 WP_000250521.1 competence type IV pilus minor pilin ComGF Machinery gene
  D7D53_RS08325 (D7D53_08325) comGE/cglE 1648317..1648619 (-) 303 WP_281268606.1 competence type IV pilus minor pilin ComGE Machinery gene
  D7D53_RS08330 (D7D53_08330) comGD/cglD 1648582..1648986 (-) 405 WP_245941793.1 competence type IV pilus minor pilin ComGD Machinery gene
  D7D53_RS08335 (D7D53_08335) comGC/cglC 1648979..1649305 (-) 327 WP_045606658.1 competence type IV pilus major pilin ComGC Machinery gene
  D7D53_RS08340 (D7D53_08340) comGB/cglB 1649307..1650323 (-) 1017 WP_120770673.1 competence type IV pilus assembly protein ComGB Machinery gene
  D7D53_RS08345 (D7D53_08345) comGA/cglA/cilD 1650271..1651212 (-) 942 WP_120770674.1 competence type IV pilus ATPase ComGA Machinery gene
  D7D53_RS08350 (D7D53_08350) - 1651288..1651653 (-) 366 WP_120770675.1 DUF1033 family protein -
  D7D53_RS08355 (D7D53_08355) - 1651805..1652863 (-) 1059 WP_120770676.1 zinc-dependent alcohol dehydrogenase family protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 15396.81 Da        Isoelectric Point: 10.4562

>NTDB_id=317214 D7D53_RS08315 WP_120770671.1 1647514..1647915(-) (comGG/cglG) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
MWKKKKVKAGVLLYAVTMAAIFSLLLQFYLNRQVAHHRDYALNKEKLVAFAMAKRTKDKVEQESGEQAFNLGQVSYQNKK
TSLVTTVRSSKSQYEFIFPSVKIKEEKRDKKEEVATDSSEKVEKKKSEKKENS

Nucleotide


Download         Length: 402 bp        

>NTDB_id=317214 D7D53_RS08315 WP_120770671.1 1647514..1647915(-) (comGG/cglG) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
GTGTGGAAAAAGAAAAAAGTTAAGGCTGGTGTTCTCCTCTATGCAGTCACCATGGCAGCTATCTTTAGTCTTTTGTTACA
ATTTTACTTGAACCGACAAGTCGCCCACCATCGAGACTATGCTTTAAATAAAGAAAAATTGGTCGCTTTTGCTATGGCTA
AGCGAACCAAAGATAAGGTTGAGCAAGAAAGTGGGGAACAGGCCTTTAATCTGGGTCAGGTGAGCTATCAAAATAAGAAA
ACAAGCTTAGTGACGACGGTTCGTTCGTCTAAGAGTCAATATGAATTCATCTTTCCTTCCGTCAAAATAAAAGAAGAGAA
AAGAGATAAAAAGGAAGAGGTAGCGACCGATTCAAGCGAAAAAGTGGAGAAGAAAAAATCAGAAAAGAAAGAGAACTCCT
AG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A387B1Z1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus mitis NCTC 12261

90.909

90.977

0.827
  comGG/cglG Streptococcus pneumoniae Rx1

92.308

87.97

0.812
  comGG/cglG Streptococcus pneumoniae D39

92.308

87.97

0.812
  comGG/cglG Streptococcus pneumoniae R6

92.308

87.97

0.812
  comGG/cglG Streptococcus pneumoniae TIGR4

92.308

87.97

0.812
  comGG/cglG Streptococcus mitis SK321

85.95

90.977

0.782
  comYG Streptococcus mutans UA159

40.299

100

0.406
  comYG Streptococcus mutans UA140

40.299

100

0.406

Multiple sequence alignment