Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | CKAES1M_RS04330 | Genome accession | NZ_CP037925 |
| Coordinates | 899985..900449 (+) | Length | 154 a.a. |
| NCBI ID | WP_003122079.1 | Uniprot ID | P17836 |
| Organism | Pseudomonas aeruginosa strain AES1M | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 894985..905449
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKAES1M_RS04300 (CKAES1M_00847) | yacG | 895155..895355 (-) | 201 | WP_003094656.1 | DNA gyrase inhibitor YacG | - |
| CKAES1M_RS04305 (CKAES1M_00848) | coaE | 895352..895963 (-) | 612 | WP_003094654.1 | dephospho-CoA kinase | - |
| CKAES1M_RS04310 (CKAES1M_00849) | pilD | 895960..896832 (-) | 873 | WP_003107301.1 | type IV prepilin peptidase/methyltransferase PilD | Machinery gene |
| CKAES1M_RS04315 (CKAES1M_00850) | pilC | 896833..898050 (-) | 1218 | WP_003107299.1 | type II secretion system F family protein | Machinery gene |
| CKAES1M_RS04320 (CKAES1M_00851) | pilB | 898054..899754 (-) | 1701 | WP_003122078.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| CKAES1M_RS04330 (CKAES1M_00852) | pilA | 899985..900449 (+) | 465 | WP_003122079.1 | pilin | Machinery gene |
| CKAES1M_RS04335 (CKAES1M_00853) | - | 900525..901910 (+) | 1386 | WP_003122080.1 | O-antigen ligase family protein | - |
| CKAES1M_RS04345 (CKAES1M_00855) | nadC | 902091..902939 (-) | 849 | WP_003122081.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
Sequence
Protein
Download Length: 154 a.a. Molecular weight: 16277.67 Da Isoelectric Point: 8.9987
>NTDB_id=308746 CKAES1M_RS04330 WP_003122079.1 899985..900449(+) (pilA) [Pseudomonas aeruginosa strain AES1M]
MKAQKGFTLIELMIVVAIIGILAAIAIPQYQDYTARTQVTRAVSEVSALKTAAESAILEGKEIVSSATPKDTQYDIGFTE
STLLDGSGKSQIQVTDNKDGTVELVATLGKSSGSAIKGAVITVSRKNDGVWNCKITKTPTAWKPNYAPANCPKS
MKAQKGFTLIELMIVVAIIGILAAIAIPQYQDYTARTQVTRAVSEVSALKTAAESAILEGKEIVSSATPKDTQYDIGFTE
STLLDGSGKSQIQVTDNKDGTVELVATLGKSSGSAIKGAVITVSRKNDGVWNCKITKTPTAWKPNYAPANCPKS
Nucleotide
Download Length: 465 bp
>NTDB_id=308746 CKAES1M_RS04330 WP_003122079.1 899985..900449(+) (pilA) [Pseudomonas aeruginosa strain AES1M]
ATGAAAGCTCAGAAGGGTTTTACTCTGATCGAACTGATGATCGTGGTTGCGATCATCGGCATCCTGGCCGCCATTGCCAT
CCCGCAATACCAGGACTACACCGCCCGTACCCAGGTGACCCGTGCCGTGAGTGAAGTCAGCGCGCTGAAGACCGCTGCGG
AGTCGGCGATTCTGGAAGGGAAGGAGATTGTTTCCAGCGCGACTCCTAAAGATACCCAGTATGACATTGGCTTCACCGAG
TCTACTTTGCTAGATGGTTCTGGTAAGAGTCAGATCCAGGTAACGGACAATAAAGATGGCACCGTTGAGTTGGTCGCTAC
CTTGGGTAAATCTTCTGGTTCCGCTATCAAAGGGGCTGTAATCACTGTTTCGCGTAAAAATGACGGAGTCTGGAACTGCA
AAATCACCAAAACTCCTACAGCTTGGAAGCCCAACTACGCTCCGGCTAATTGCCCGAAATCCTAA
ATGAAAGCTCAGAAGGGTTTTACTCTGATCGAACTGATGATCGTGGTTGCGATCATCGGCATCCTGGCCGCCATTGCCAT
CCCGCAATACCAGGACTACACCGCCCGTACCCAGGTGACCCGTGCCGTGAGTGAAGTCAGCGCGCTGAAGACCGCTGCGG
AGTCGGCGATTCTGGAAGGGAAGGAGATTGTTTCCAGCGCGACTCCTAAAGATACCCAGTATGACATTGGCTTCACCGAG
TCTACTTTGCTAGATGGTTCTGGTAAGAGTCAGATCCAGGTAACGGACAATAAAGATGGCACCGTTGAGTTGGTCGCTAC
CTTGGGTAAATCTTCTGGTTCCGCTATCAAAGGGGCTGTAATCACTGTTTCGCGTAAAAATGACGGAGTCTGGAACTGCA
AAATCACCAAAACTCCTACAGCTTGGAAGCCCAACTACGCTCCGGCTAATTGCCCGAAATCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
44.737 |
98.701 |
0.442 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
44.444 |
99.351 |
0.442 |
| pilA | Pseudomonas aeruginosa PAK |
45.985 |
88.961 |
0.409 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
39.073 |
98.052 |
0.383 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
37.255 |
99.351 |
0.37 |
| pilA2 | Legionella pneumophila str. Paris |
38 |
97.403 |
0.37 |
| pilA | Vibrio cholerae strain A1552 |
36.774 |
100 |
0.37 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
36.774 |
100 |
0.37 |
| pilA | Vibrio cholerae C6706 |
36.774 |
100 |
0.37 |