Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | DWB94_RS05985 | Genome accession | NZ_CP031277 |
| Coordinates | 1193160..1193471 (+) | Length | 103 a.a. |
| NCBI ID | WP_017176238.1 | Uniprot ID | - |
| Organism | Staphylococcus hominis strain 19A | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1188160..1198471
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DWB94_RS05955 (DWB94_05955) | - | 1188940..1189143 (+) | 204 | WP_017176233.1 | YqgQ family protein | - |
| DWB94_RS05960 (DWB94_05960) | - | 1189140..1190126 (+) | 987 | WP_002449785.1 | ROK family glucokinase | - |
| DWB94_RS05965 (DWB94_05965) | - | 1190126..1190449 (+) | 324 | WP_017176234.1 | MTH1187 family thiamine-binding protein | - |
| DWB94_RS05970 (DWB94_05970) | - | 1190451..1191077 (+) | 627 | WP_017176235.1 | MBL fold metallo-hydrolase | - |
| DWB94_RS05975 (DWB94_05975) | comGA | 1191129..1192103 (+) | 975 | WP_049415532.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DWB94_RS05980 (DWB94_05980) | comGB | 1192124..1193140 (+) | 1017 | WP_145426990.1 | competence type IV pilus assembly protein ComGB | - |
| DWB94_RS05985 (DWB94_05985) | comGC | 1193160..1193471 (+) | 312 | WP_017176238.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DWB94_RS05990 (DWB94_05990) | comGD | 1193461..1193895 (+) | 435 | WP_049382010.1 | competence type IV pilus minor pilin ComGD | - |
| DWB94_RS05995 (DWB94_05995) | - | 1194087..1194584 (+) | 498 | WP_017176240.1 | competence protein ComG | - |
| DWB94_RS06005 (DWB94_06005) | - | 1194749..1195258 (+) | 510 | WP_017176242.1 | shikimate kinase | - |
| DWB94_RS06010 (DWB94_06010) | gcvT | 1195453..1196544 (+) | 1092 | WP_145423915.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| DWB94_RS06015 (DWB94_06015) | gcvPA | 1196561..1197913 (+) | 1353 | WP_019835697.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11400.52 Da Isoelectric Point: 9.1831
>NTDB_id=305391 DWB94_RS05985 WP_017176238.1 1193160..1193471(+) (comGC) [Staphylococcus hominis strain 19A]
MKKFKNKLKAFTLIEMLLVLLIISVLLILIIPNIAKQMSHIQSTGCEAQVKMVNSQIEAYTLKHNRVPNSIEDLVTEGFI
KQGQSSCKSGETISIKNGEAVAE
MKKFKNKLKAFTLIEMLLVLLIISVLLILIIPNIAKQMSHIQSTGCEAQVKMVNSQIEAYTLKHNRVPNSIEDLVTEGFI
KQGQSSCKSGETISIKNGEAVAE
Nucleotide
Download Length: 312 bp
>NTDB_id=305391 DWB94_RS05985 WP_017176238.1 1193160..1193471(+) (comGC) [Staphylococcus hominis strain 19A]
ATGAAAAAATTCAAAAATAAATTAAAAGCTTTTACTTTAATTGAGATGTTACTTGTACTATTAATAATTAGTGTTTTACT
CATTCTTATTATTCCGAATATAGCTAAACAAATGTCACATATTCAATCAACAGGATGTGAAGCACAAGTGAAAATGGTCA
ATAGTCAAATTGAAGCTTATACTTTAAAACATAATAGAGTTCCTAATTCTATTGAGGACTTAGTAACTGAAGGGTTTATA
AAACAAGGGCAATCATCTTGTAAGTCTGGAGAAACTATCAGTATTAAAAATGGAGAAGCAGTTGCAGAGTAA
ATGAAAAAATTCAAAAATAAATTAAAAGCTTTTACTTTAATTGAGATGTTACTTGTACTATTAATAATTAGTGTTTTACT
CATTCTTATTATTCCGAATATAGCTAAACAAATGTCACATATTCAATCAACAGGATGTGAAGCACAAGTGAAAATGGTCA
ATAGTCAAATTGAAGCTTATACTTTAAAACATAATAGAGTTCCTAATTCTATTGAGGACTTAGTAACTGAAGGGTTTATA
AAACAAGGGCAATCATCTTGTAAGTCTGGAGAAACTATCAGTATTAAAAATGGAGAAGCAGTTGCAGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus N315 |
79.412 |
99.029 |
0.786 |
| comGC | Staphylococcus aureus MW2 |
79.412 |
99.029 |
0.786 |
| comGC/cglC | Streptococcus mitis SK321 |
46.875 |
93.204 |
0.437 |
| comGC/cglC | Streptococcus pneumoniae D39 |
45.833 |
93.204 |
0.427 |
| comGC/cglC | Streptococcus pneumoniae R6 |
45.833 |
93.204 |
0.427 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
45.833 |
93.204 |
0.427 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
45.833 |
93.204 |
0.427 |
| comYC | Streptococcus mutans UA140 |
48.315 |
86.408 |
0.417 |
| comYC | Streptococcus mutans UA159 |
48.315 |
86.408 |
0.417 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
44.211 |
92.233 |
0.408 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
47.727 |
85.437 |
0.408 |
| comYC | Streptococcus suis isolate S10 |
46.512 |
83.495 |
0.388 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
48.193 |
80.583 |
0.388 |