Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Machinery gene
Locus tag   DV311_RS09255 Genome accession   NZ_CP031253
Coordinates   1689487..1690719 (+) Length   410 a.a.
NCBI ID   WP_003710974.1    Uniprot ID   E4ZBA3
Organism   Neisseria lactamica strain M17106     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1684487..1695719
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV311_RS09235 fabI 1685519..1686304 (-) 786 WP_002223367.1 enoyl-ACP reductase FabI -
  DV311_RS09240 dapD 1686459..1687280 (-) 822 WP_002224875.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase -
  DV311_RS09245 - 1687290..1687520 (-) 231 WP_025458514.1 hypothetical protein -
  DV311_RS09250 pgi 1687490..1689133 (-) 1644 WP_114935775.1 glucose-6-phosphate isomerase -
  DV311_RS09255 pilG 1689487..1690719 (+) 1233 WP_003710974.1 type 4 pilus assembly protein PilG Machinery gene
  DV311_RS09260 pilD 1690793..1691653 (+) 861 WP_114935776.1 prepilin peptidase Machinery gene
  DV311_RS09265 coaE 1691655..1692287 (+) 633 WP_114935777.1 dephospho-CoA kinase -
  DV311_RS09270 - 1692280..1692489 (+) 210 WP_114935778.1 DNA gyrase inhibitor YacG -
  DV311_RS09275 pilF 1692574..1694250 (-) 1677 WP_114935779.1 type IV-A pilus assembly ATPase PilB Machinery gene
  DV311_RS09290 - 1694882..1695328 (-) 447 WP_003710982.1 DUF441 domain-containing protein -

Sequence


Protein


Download         Length: 410 a.a.        Molecular weight: 45246.23 Da        Isoelectric Point: 10.0085

>NTDB_id=305067 DV311_RS09255 WP_003710974.1 1689487..1690719(+) (pilG) [Neisseria lactamica strain M17106]
MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARKKLAKRGIRPLQVTRVKTSSKRKITQEDITVFTRQLS
TMIKAGLPLMQAFEIVARGHGNPSMTEMLMEIRSNVEQGSTLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAVY
KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTVMDMSDFFVSYGWMVLIALGFAI
YGFLKLKARSIKIQRRMDALLLRMPIFGDIVRKGTIARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRV
IQGLSMTSGMRATELFPNMMVQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIGTLLVAMYL
PLFNLGNVVG

Nucleotide


Download         Length: 1233 bp        

>NTDB_id=305067 DV311_RS09255 WP_003710974.1 1689487..1690719(+) (pilG) [Neisseria lactamica strain M17106]
ATGGCTAAAAATGGGGGATTTTCTTTGTTCGCAAAGAAAGAAAAACGCTTTATCTTTGAAGGCAGGCATTCTGCCTCCGA
CAAACTGGTCAACGGCGAAGTATCCGCGTTTACCGAAGAAGAGGCGCGCAAAAAACTCGCCAAACGCGGCATCCGCCCGT
TGCAGGTTACCCGTGTGAAAACAAGCTCCAAGCGCAAAATCACACAAGAAGACATCACCGTCTTCACCCGCCAGCTGTCC
ACGATGATCAAGGCGGGCCTGCCGCTGATGCAGGCATTTGAAATCGTGGCGCGCGGACACGGCAACCCGTCTATGACGGA
AATGCTGATGGAAATCCGCAGCAATGTGGAACAGGGCAGCACATTGAGCCGCGCATTCTCAAACCACCCGAAATATTTCG
ACCGCTTCTACTGCAACCTGGTTGCGGCGGGCGAAACGGGCGGCGTGTTGGAAAGCCTGCTGGACAAATTGGCAGTCTAT
AAAGAAAAAACCCAGGCCATCCGCAAAAAGGTAAAAACCGCACTGACCTATCCGGTATCCGTCATCGCCGTCGCCATCGG
TTTAGTATTCGTGATGATGATTTTCGTACTGCCCGCCTTTAAAGAGGTTTACGCCAATATGGGCGCGGAGCTTCCCGCAC
TGACCCAAACAGTGATGGATATGTCCGACTTTTTCGTCTCATACGGCTGGATGGTGCTGATCGCACTGGGCTTTGCCATA
TACGGCTTCCTCAAATTGAAGGCGCGTTCGATTAAAATCCAACGGCGTATGGATGCCCTGCTGCTGCGTATGCCGATTTT
CGGAGACATCGTCCGTAAAGGGACGATTGCCCGCTGGGGCAGGACGACGGCGACACTGATTGCGGCAGGCGTGCCTTTGG
TCGATGTATTGGACTCCACTGCCGGCGCGGCGGGCAATTTAATCTATGAAGAAGCCACTCGGGAAATCCGTACGCGCGTC
ATCCAAGGCCTGTCTATGACTTCGGGGATGCGTGCGACGGAACTGTTCCCCAATATGATGGTGCAGATGTCCTCCATCGG
CGAGGAATCGGGTTCTTTGGACGATATGCTCAACAAAGCCGCCGAATTTTATGAAGACGAGGTGGACAATGCGGTCGGCA
GGCTGTCCGCTATGATGGAGCCGATCATTATCGTGATTTTGGGCTTGGTCATCGGTACGCTTCTGGTCGCTATGTATCTG
CCGCTGTTTAATTTGGGCAACGTGGTCGGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB E4ZBA3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria gonorrhoeae MS11

97.8

99.756

0.976

  pilG Neisseria meningitidis 44/76-A

97.066

99.756

0.968

  pilC Acinetobacter baumannii D1279779

47.487

97.073

0.461

  pilC Acinetobacter baylyi ADP1

46.115

97.317

0.449

  pilC Legionella pneumophila strain ERS1305867

45.34

96.829

0.439

  pilC Pseudomonas stutzeri DSM 10701

44.527

98.049

0.437

  pilC Vibrio cholerae strain A1552

40.943

98.293

0.402

  pilC Vibrio campbellii strain DS40M4

39.066

99.268

0.388


Multiple sequence alignment