Detailed information NTG0304686

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: DV131_RS01965
• Genome accession: NZ_CP031246
• Coordinates: 341361..341795 (-)
• Length: 144 a.a.
• NCBI ID: WP_033606693.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain M26368
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 336361..346795

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV131_RS01930	rnpA	336775..337146 (-)	372	WP_000739246.1	ribonuclease P protein component	-
DV131_RS12050	-	337163..337294 (-)	132	WP_000768904.1	hypothetical protein	-
DV131_RS01935	-	337295..338485 (-)	1191	WP_000167766.1	acetate kinase	-
DV131_RS01940	comYH	338536..339489 (-)	954	WP_000345133.1	class I SAM-dependent methyltransferase	Machinery gene
DV131_RS01945	-	339550..340144 (-)	595	Protein_342	methyltransferase domain-containing protein	-
DV131_RS01950	comGG/cglG	340281..340694 (-)	414	WP_000265615.1	competence type IV pilus minor pilin ComGG	Machinery gene
DV131_RS01955	comGF/cglF	340672..341133 (-)	462	WP_000250520.1	competence type IV pilus minor pilin ComGF	Machinery gene
DV131_RS01960	comGE/cglE	341096..341398 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
DV131_RS01965	comGD/cglD	341361..341795 (-)	435	WP_033606693.1	competence type IV pilus minor pilin ComGD	Machinery gene
DV131_RS01970	comGC/cglC	341758..342081 (-)	324	WP_000738628.1	comG operon protein ComGC	Machinery gene
DV131_RS01975	comGB/cglB	342083..343099 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
DV131_RS01980	comGA/cglA/cilD	343047..343988 (-)	942	WP_000249555.1	competence type IV pilus ATPase ComGA	Machinery gene
DV131_RS01985	-	344063..344428 (-)	366	WP_000286415.1	DUF1033 family protein	-
DV131_RS01990	-	344579..345637 (-)	1059	WP_000649466.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15802.39 Da
• Isoelectric Point: 10.5150

>NTDB_id=304686 DV131_RS01965 WP_033606693.1 341361..341795(-) (comGD/cglD) [Streptococcus pneumoniae strain M26368]
MINKILVKSLKIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQM
ISNGSQKLPVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=304686 DV131_RS01965 WP_033606693.1 341361..341795(-) (comGD/cglD) [Streptococcus pneumoniae strain M26368]
ATGATAAACAAAATACTAGTCAAATCGTTAAAGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGT
GAGTATCCTTGCCTTGGGCTTGTCCGGCTCTGTCCAGTCCACTTTTGCAGCGGTAGAGGAACAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACCCAAAAACGCAGTGTAGCTAGTCAACAAAAGACTAGTCTGAACTTGGATGGGCAGATG
ATTAGCAATGGCAGTCAAAAGTTGCCAGTCCCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGTGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	94.444	100	0.944
comGD/cglD	Streptococcus pneumoniae Rx1	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae D39	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae R6	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae TIGR4	97.744	92.361	0.903
comGD/cglD	Streptococcus mitis SK321	96.241	92.361	0.889
comYD	Streptococcus gordonii str. Challis substr. CH1	56.835	96.528	0.549
comYD	Streptococcus mutans UA140	49.612	89.583	0.444
comYD	Streptococcus mutans UA159	49.612	89.583	0.444