Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | DEH84_RS02395 | Genome accession | NZ_CP029210 |
| Coordinates | 542313..542765 (+) | Length | 150 a.a. |
| NCBI ID | WP_109034435.1 | Uniprot ID | A0A2U8FQ15 |
| Organism | Aquabacterium olei strain NBRC 110486 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 537313..547765
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DEH84_RS02370 (DEH84_02370) | - | 537321..538016 (+) | 696 | WP_109034425.1 | TerC family protein | - |
| DEH84_RS19345 | - | 538022..539554 (+) | 1533 | WP_245932660.1 | serine/threonine-protein kinase | - |
| DEH84_RS02380 (DEH84_02380) | - | 539647..540447 (+) | 801 | WP_109034428.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| DEH84_RS02385 (DEH84_02385) | - | 540479..541213 (+) | 735 | WP_109034430.1 | FHA domain-containing protein | - |
| DEH84_RS02390 (DEH84_02390) | - | 541245..542069 (+) | 825 | WP_109034432.1 | 3',5'-cyclic-nucleotide phosphodiesterase | - |
| DEH84_RS02395 (DEH84_02395) | pilA | 542313..542765 (+) | 453 | WP_109034435.1 | pilin | Machinery gene |
| DEH84_RS19040 | - | 542762..544624 (+) | 1863 | WP_159098814.1 | hypothetical protein | - |
| DEH84_RS02405 (DEH84_02405) | - | 544601..545830 (-) | 1230 | WP_159098815.1 | glycosyltransferase family 87 protein | - |
| DEH84_RS02410 (DEH84_02410) | - | 545909..547549 (+) | 1641 | WP_109034443.1 | glycosyltransferase family 39 protein | - |
Sequence
Protein
Download Length: 150 a.a. Molecular weight: 14976.85 Da Isoelectric Point: 9.1010
>NTDB_id=291230 DEH84_RS02395 WP_109034435.1 542313..542765(+) (pilA) [Aquabacterium olei strain NBRC 110486]
MKRVQQGFTLIELMIVVAIIGILAAVALPAYQDYTIRARVTEGLSLASSAKTTVSENAAAGTSPLNLGWTSPNSTANVSS
VSVAGSTGVITITYTSTAGGSASSANSLTLTPTSGGSPLTAGATATGSINWACSGTLENKYRPASCRSGT
MKRVQQGFTLIELMIVVAIIGILAAVALPAYQDYTIRARVTEGLSLASSAKTTVSENAAAGTSPLNLGWTSPNSTANVSS
VSVAGSTGVITITYTSTAGGSASSANSLTLTPTSGGSPLTAGATATGSINWACSGTLENKYRPASCRSGT
Nucleotide
Download Length: 453 bp
>NTDB_id=291230 DEH84_RS02395 WP_109034435.1 542313..542765(+) (pilA) [Aquabacterium olei strain NBRC 110486]
ATGAAGCGCGTTCAACAAGGTTTTACCCTGATCGAACTGATGATCGTTGTGGCGATCATCGGTATTCTGGCGGCTGTGGC
GCTGCCGGCGTATCAGGACTACACCATCCGGGCCCGTGTGACTGAGGGTCTGTCTCTAGCATCGTCCGCTAAAACCACGG
TGTCCGAGAATGCCGCAGCGGGTACCAGCCCGCTGAACCTTGGTTGGACCTCCCCCAACTCGACGGCCAACGTCTCCAGC
GTTAGCGTTGCAGGTTCTACTGGGGTGATCACCATTACCTACACGTCCACTGCTGGGGGTTCTGCATCGTCCGCAAACTC
ACTCACACTGACGCCTACGTCTGGCGGCTCGCCGCTGACCGCCGGTGCAACTGCAACGGGCAGCATCAATTGGGCATGCA
GCGGCACGCTGGAGAACAAGTACCGTCCTGCTTCTTGCCGCAGCGGCACATGA
ATGAAGCGCGTTCAACAAGGTTTTACCCTGATCGAACTGATGATCGTTGTGGCGATCATCGGTATTCTGGCGGCTGTGGC
GCTGCCGGCGTATCAGGACTACACCATCCGGGCCCGTGTGACTGAGGGTCTGTCTCTAGCATCGTCCGCTAAAACCACGG
TGTCCGAGAATGCCGCAGCGGGTACCAGCCCGCTGAACCTTGGTTGGACCTCCCCCAACTCGACGGCCAACGTCTCCAGC
GTTAGCGTTGCAGGTTCTACTGGGGTGATCACCATTACCTACACGTCCACTGCTGGGGGTTCTGCATCGTCCGCAAACTC
ACTCACACTGACGCCTACGTCTGGCGGCTCGCCGCTGACCGCCGGTGCAACTGCAACGGGCAGCATCAATTGGGCATGCA
GCGGCACGCTGGAGAACAAGTACCGTCCTGCTTCTTGCCGCAGCGGCACATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
52.121 |
100 |
0.573 |
| pilA2 | Legionella pneumophila str. Paris |
56.757 |
98.667 |
0.56 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
56.757 |
98.667 |
0.56 |
| comP | Acinetobacter baylyi ADP1 |
47.771 |
100 |
0.5 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
35.789 |
100 |
0.453 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
36 |
100 |
0.42 |
| pilE | Neisseria gonorrhoeae MS11 |
35.795 |
100 |
0.42 |
| pilA/pilA1 | Eikenella corrodens VA1 |
37.805 |
100 |
0.413 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
36.913 |
99.333 |
0.367 |