Detailed information NTG0284678

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: SK637_RS01035
• Genome accession: NZ_CP028415
• Coordinates: 209989..210450 (+)
• Length: 153 a.a.
• NCBI ID: WP_033688037.1
• Uniprot ID: -
• Organism: Streptococcus mitis strain SK637
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 204989..215450

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SK637_RS01000 (SK637_00199)	-	205486..206544 (+)	1059	WP_033688031.1	zinc-dependent alcohol dehydrogenase family protein	-
SK637_RS01005 (SK637_00200)	-	206690..207055 (+)	366	WP_033688032.1	DUF1033 family protein	-
SK637_RS01010 (SK637_00201)	comGA/cglA/cilD	207131..208072 (+)	942	WP_033688033.1	competence type IV pilus ATPase ComGA	Machinery gene
SK637_RS01015 (SK637_00202)	comGB/cglB	208020..209036 (+)	1017	WP_080710441.1	competence type IV pilus assembly protein ComGB	Machinery gene
SK637_RS01020 (SK637_00203)	comGC/cglC	209038..209364 (+)	327	WP_033688035.1	competence type IV pilus major pilin ComGC	Machinery gene
SK637_RS01025 (SK637_00204)	comGD/cglD	209357..209761 (+)	405	WP_000588010.1	competence type IV pilus minor pilin ComGD	Machinery gene
SK637_RS01030 (SK637_00205)	comGE/cglE	209724..210026 (+)	303	WP_272898261.1	competence type IV pilus minor pilin ComGE	Machinery gene
SK637_RS01035 (SK637_00206)	comGF/cglF	209989..210450 (+)	462	WP_033688037.1	competence type IV pilus minor pilin ComGF	Machinery gene
SK637_RS01040 (SK637_00207)	comGG/cglG	210428..210838 (+)	411	WP_033688038.1	competence type IV pilus minor pilin ComGG	Machinery gene
SK637_RS01045 (SK637_00208)	-	210871..211458 (+)	588	WP_033688039.1	class I SAM-dependent methyltransferase	-
SK637_RS01050 (SK637_00209)	comYH	211519..212472 (+)	954	WP_033688040.1	class I SAM-dependent methyltransferase	Machinery gene
SK637_RS01055 (SK637_00210)	-	212522..213712 (+)	1191	WP_033688041.1	acetate kinase	-
SK637_RS01060 (SK637_00211)	rnpA	213862..214233 (+)	372	WP_033688042.1	ribonuclease P protein component	-
SK637_RS01065 (SK637_00212)	-	214208..215032 (+)	825	WP_201798902.1	membrane protein insertase YidC	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17867.52 Da
• Isoelectric Point: 9.3131

>NTDB_id=284678 SK637_RS01035 WP_033688037.1 209989..210450(+) (comGF/cglF) [Streptococcus mitis strain SK637]
MVQNSCWQSKSHKVKAFTLLESLIALIVISGSLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RLYMKQDGKEIAIGKSKSDDFRKTDVSGRGYQPMVYGLKSAQITEENQLVRFRFQFQKGLEREFIYRVEKAKS

Nucleotide

• Length: 462 bp

>NTDB_id=284678 SK637_RS01035 WP_033688037.1 209989..210450(+) (comGF/cglF) [Streptococcus mitis strain SK637]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGATTGCCCTCAT
TGTCATCAGTGGAAGCTTACTCCTCTTTCAAGCCATGAGTCAGCTCCTCATTTCAGAAGTTCGATACCAGCAGCAAAGTG
AGCAAAAAGAGTGGCTCTTGTTTGTGGACCAGTTGGAGGCAGAATTAGATCGTTCGCAGTTCGAAAAAGTGGAGGGCAAT
CGTCTCTATATGAAGCAGGATGGCAAGGAAATTGCGATAGGTAAGTCAAAATCGGATGATTTTCGAAAAACTGATGTCAG
TGGACGAGGTTATCAGCCTATGGTTTATGGCCTCAAATCTGCGCAGATTACAGAGGAGAATCAACTGGTTCGCTTTCGTT
TTCAATTCCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGCAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis NCTC 12261	96.078	100	0.961
comGF/cglF	Streptococcus mitis SK321	94.771	100	0.948
comGF/cglF	Streptococcus pneumoniae Rx1	92.157	100	0.922
comGF/cglF	Streptococcus pneumoniae D39	92.157	100	0.922
comGF/cglF	Streptococcus pneumoniae R6	92.157	100	0.922
comGF/cglF	Streptococcus pneumoniae TIGR4	92.157	100	0.922
comGF	Lactococcus lactis subsp. cremoris KW2	40.714	91.503	0.373