Detailed information NTG0284676

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: SK637_RS01025
• Genome accession: NZ_CP028415
• Coordinates: 209357..209761 (+)
• Length: 134 a.a.
• NCBI ID: WP_000588010.1
• Uniprot ID: -
• Organism: Streptococcus mitis strain SK637
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 204357..214761

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SK637_RS01000 (SK637_00199)	-	205486..206544 (+)	1059	WP_033688031.1	zinc-dependent alcohol dehydrogenase family protein	-
SK637_RS01005 (SK637_00200)	-	206690..207055 (+)	366	WP_033688032.1	DUF1033 family protein	-
SK637_RS01010 (SK637_00201)	comGA/cglA/cilD	207131..208072 (+)	942	WP_033688033.1	competence type IV pilus ATPase ComGA	Machinery gene
SK637_RS01015 (SK637_00202)	comGB/cglB	208020..209036 (+)	1017	WP_080710441.1	competence type IV pilus assembly protein ComGB	Machinery gene
SK637_RS01020 (SK637_00203)	comGC/cglC	209038..209364 (+)	327	WP_033688035.1	competence type IV pilus major pilin ComGC	Machinery gene
SK637_RS01025 (SK637_00204)	comGD/cglD	209357..209761 (+)	405	WP_000588010.1	competence type IV pilus minor pilin ComGD	Machinery gene
SK637_RS01030 (SK637_00205)	comGE/cglE	209724..210026 (+)	303	WP_272898261.1	competence type IV pilus minor pilin ComGE	Machinery gene
SK637_RS01035 (SK637_00206)	comGF/cglF	209989..210450 (+)	462	WP_033688037.1	competence type IV pilus minor pilin ComGF	Machinery gene
SK637_RS01040 (SK637_00207)	comGG/cglG	210428..210838 (+)	411	WP_033688038.1	competence type IV pilus minor pilin ComGG	Machinery gene
SK637_RS01045 (SK637_00208)	-	210871..211458 (+)	588	WP_033688039.1	class I SAM-dependent methyltransferase	-
SK637_RS01050 (SK637_00209)	comYH	211519..212472 (+)	954	WP_033688040.1	class I SAM-dependent methyltransferase	Machinery gene
SK637_RS01055 (SK637_00210)	-	212522..213712 (+)	1191	WP_033688041.1	acetate kinase	-
SK637_RS01060 (SK637_00211)	rnpA	213862..214233 (+)	372	WP_033688042.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14608.80 Da
• Isoelectric Point: 10.2164

>NTDB_id=284676 SK637_RS01025 WP_000588010.1 209357..209761(+) (comGD/cglD) [Streptococcus mitis strain SK637]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKASLNLDGQTISNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=284676 SK637_RS01025 WP_000588010.1 209357..209761(+) (comGD/cglD) [Streptococcus mitis strain SK637]
ATGATTAAGGCCTTTACCATGCTTGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTATCCGGCTC
TGTCCAGTCCACTTTTGCGGCGGTGGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACTCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGGCTAGTCTGAACTTAGATGGGCAGACCATTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAAGCACCATCGGGACAAAGTATTACATTTGATCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACTAGCAAAGGAGCGATTCGTTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae Rx1	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae D39	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae R6	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae TIGR4	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	97.744	99.254	0.97
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478