Detailed information NTG0276620

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: C6I29_RS13315
• Genome accession: NZ_CP027365
• Coordinates: 2829225..2831405 (-)
• Length: 726 a.a.
• NCBI ID: WP_005024212.1
• Uniprot ID: -
• Organism: Acinetobacter radioresistens strain DSSKY-A-001
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2824225..2836405

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C6I29_RS13300	-	2826662..2827525 (-)	864	WP_105919100.1	hypothetical protein	-
C6I29_RS13305	aroB	2827533..2828618 (-)	1086	WP_005024217.1	3-dehydroquinate synthase	-
C6I29_RS14900	aroK	2828637..2829188 (-)	552	WP_005024215.1	shikimate kinase AroK	-
C6I29_RS13315	pilQ	2829225..2831405 (-)	2181	WP_005024212.1	type IV pilus secretin PilQ	Machinery gene
C6I29_RS13320	pilP	2831423..2831950 (-)	528	WP_005018049.1	pilus assembly protein PilP	Machinery gene
C6I29_RS13325	comO	2831947..2832657 (-)	711	WP_005404626.1	type 4a pilus biogenesis protein PilO	Machinery gene
C6I29_RS13330	pilN	2832654..2833313 (-)	660	WP_005018044.1	PilN domain-containing protein	Machinery gene
C6I29_RS13335	pilM	2833313..2834371 (-)	1059	WP_005018042.1	pilus assembly protein PilM	Machinery gene

Sequence

Protein

• Length: 726 a.a.
• Molecular weight: 78765.46 Da
• Isoelectric Point: 5.4971

>NTDB_id=276620 C6I29_RS13315 WP_005024212.1 2829225..2831405(-) (pilQ) [Acinetobacter radioresistens strain DSSKY-A-001]
MKKSFQEFLMGDGNSMIHLYRQFAMGAVAVAMMQVASAAVNITNIVPMQIPGQGTEIRVMFNGLPPQPQAYQLEQPSRLI
LDFDQAKQNLKQPSIPVATNEASAIHVASDEQRSRIIVSLKDAGAFTTRVEGNTFILKINPVTGAPTVLPQPVAVAQQPA
QGISNIGFQRGSQGEGQVLIDFLNPNTPADVQQQGSKVIVRMLGNKIPSHLIRRLNMNDFATPVSTVDAYNEGGNGIITI
QSTGSYEYMAYQTENRLTVSLKRPEEKSTVKTRSAPNYSGKKVSLDFQDIEVRRVLQLLADFTGINLVAADSVQGNITLR
LKDVPWDQALDIILKTKNLDKRRNGDVIWIAPVAELIKAEEEEAKAIAQSTRLMPLQTEYIQLNYAKAVDIEKLITQGRN
SGNGSANGASNNTEALGDSVGSLLSPRGTISIDPRTNTLIINDTAQKLDQIRRMIDLLDVAVKQVMVEARIVRASTDFTK
EMGVKWGILSQGITRNNSLLVGGSETTLWNLRDPDDEGKYTIERPQNLNVDLGVTAPGASRIAFGLISLSDFMLDLELSA
LQADGYGEVISTPKVLTADKQQARVASGTQIPYQSSEGGGANAVSTTEFVDATLSLNVTPSITPDGKIQMLLNITSDTPG
NPTPTGQIAINKNEINTNVLVNNGETVVLGGIFEQETRNTQTKVPVLGDLPGVGRLFRRDAKSDNKRELLIFVTPRIVND
SATGNH

Nucleotide

• Length: 2181 bp

>NTDB_id=276620 C6I29_RS13315 WP_005024212.1 2829225..2831405(-) (pilQ) [Acinetobacter radioresistens strain DSSKY-A-001]
ATGAAAAAGAGTTTTCAAGAATTTTTGATGGGGGATGGCAACAGCATGATTCATTTATATCGTCAATTTGCGATGGGAGC
AGTTGCTGTAGCAATGATGCAGGTAGCAAGTGCAGCGGTCAATATTACCAATATTGTACCTATGCAGATTCCGGGACAAG
GGACAGAAATTCGAGTCATGTTTAATGGATTGCCGCCCCAGCCCCAGGCTTATCAGCTTGAACAGCCTTCGCGACTGATC
TTAGACTTTGATCAGGCCAAACAAAATCTTAAACAGCCTAGTATTCCGGTTGCTACCAATGAAGCAAGCGCAATTCATGT
GGCCTCTGATGAACAACGTTCCCGAATTATTGTAAGTTTAAAAGATGCAGGTGCCTTTACTACCCGTGTAGAAGGCAATA
CTTTTATTTTAAAGATTAATCCGGTAACAGGCGCGCCTACAGTATTGCCACAGCCAGTTGCTGTAGCACAGCAGCCTGCT
CAGGGTATCTCGAACATTGGTTTCCAGCGTGGAAGTCAGGGCGAGGGACAGGTTTTAATTGATTTTCTGAACCCGAATAC
TCCTGCTGATGTACAGCAGCAGGGAAGTAAAGTCATAGTCAGGATGCTGGGAAATAAAATCCCTTCCCATCTAATCCGCC
GTTTGAATATGAATGATTTTGCCACGCCGGTCTCGACTGTTGATGCCTATAATGAAGGCGGTAATGGCATTATTACTATT
CAATCAACTGGCAGTTATGAGTATATGGCGTATCAGACTGAGAACCGCTTAACAGTCAGTTTAAAGCGCCCGGAAGAAAA
GAGTACGGTCAAAACCCGTTCTGCACCTAATTATAGCGGTAAAAAGGTTTCACTCGACTTTCAGGATATTGAGGTTCGTC
GGGTATTACAGTTGTTAGCAGATTTCACTGGTATCAACCTGGTTGCAGCCGACTCTGTTCAGGGAAATATTACGTTGCGC
CTGAAAGATGTACCATGGGACCAGGCTTTAGACATTATTTTAAAAACCAAAAACCTGGATAAACGTCGTAATGGTGATGT
AATCTGGATTGCTCCGGTTGCAGAGCTGATTAAAGCAGAAGAGGAAGAGGCTAAGGCAATTGCGCAAAGTACCAGACTTA
TGCCTTTACAAACTGAATATATCCAGCTGAATTATGCAAAAGCTGTCGATATCGAAAAACTGATTACCCAAGGCAGAAAT
AGTGGTAATGGTAGTGCTAACGGTGCTTCAAACAATACGGAAGCACTGGGTGATAGTGTGGGAAGCCTGCTAAGTCCAAG
AGGAACCATTTCAATAGACCCACGTACCAATACCTTAATCATTAATGATACGGCTCAGAAACTTGACCAGATCCGCCGTA
TGATTGATCTTCTGGATGTAGCGGTAAAACAGGTAATGGTTGAGGCCCGTATTGTCAGGGCTAGTACTGACTTCACCAAA
GAAATGGGCGTGAAGTGGGGAATTCTTTCACAGGGTATTACCCGTAATAACAGCCTGCTGGTCGGCGGCAGTGAAACCAC
CTTATGGAATCTGCGTGATCCTGATGATGAAGGCAAATACACCATAGAGCGTCCACAAAACCTGAATGTGGATTTAGGCG
TTACAGCTCCGGGTGCAAGCCGTATTGCCTTCGGTTTAATTAGTCTTTCTGATTTTATGCTTGATCTCGAATTGTCAGCC
TTGCAGGCTGATGGTTATGGTGAAGTCATTTCTACGCCGAAAGTACTAACAGCTGACAAACAGCAGGCTCGAGTTGCTTC
TGGTACTCAAATTCCCTACCAGTCTTCAGAGGGCGGTGGCGCCAATGCAGTTTCTACCACTGAATTTGTGGATGCTACTT
TAAGTCTGAATGTAACACCAAGTATTACTCCTGATGGTAAAATCCAGATGTTACTGAACATTACCAGCGATACTCCGGGG
AACCCGACACCAACTGGCCAGATCGCGATTAACAAGAATGAAATTAATACTAATGTGCTGGTTAACAATGGTGAAACTGT
AGTCCTTGGCGGTATTTTTGAACAGGAAACCAGGAATACGCAAACGAAAGTACCTGTTCTCGGAGACCTGCCGGGTGTAG
GCCGTTTATTCCGCCGTGATGCTAAAAGTGATAACAAGCGTGAGTTACTGATTTTTGTCACACCACGAATTGTTAATGAC
AGTGCGACTGGAAATCATTAA

Domains

Predicted by InterproScan.

• Secretin and TonB N terminus short domain (STN) (307-352)

• Bacterial type II/III secretion system short domain (Secretin_N) (379-464)

• AMIN domain (AMIN) (55-136)

• Bacterial type II and III secretion system protein (Secretin) (560-718)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	73.416	100	0.734
pilQ	Acinetobacter baumannii strain A118	73.278	100	0.733
comQ	Acinetobacter baylyi ADP1	73.072	98.209	0.718
pilQ	Pseudomonas aeruginosa PAK	39.669	100	0.397
pilQ	Legionella pneumophila strain Lp02	38.384	95.455	0.366
pilQ	Legionella pneumophila strain ERS1305867	38.273	95.73	0.366