Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | C6I29_RS13330 | Genome accession | NZ_CP027365 |
| Coordinates | 2832654..2833313 (-) | Length | 219 a.a. |
| NCBI ID | WP_005018044.1 | Uniprot ID | A0A062C2K4 |
| Organism | Acinetobacter radioresistens strain DSSKY-A-001 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2827654..2838313
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6I29_RS14900 | aroK | 2828637..2829188 (-) | 552 | WP_005024215.1 | shikimate kinase AroK | - |
| C6I29_RS13315 | pilQ | 2829225..2831405 (-) | 2181 | WP_005024212.1 | type IV pilus secretin PilQ | Machinery gene |
| C6I29_RS13320 | pilP | 2831423..2831950 (-) | 528 | WP_005018049.1 | pilus assembly protein PilP | Machinery gene |
| C6I29_RS13325 | comO | 2831947..2832657 (-) | 711 | WP_005404626.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| C6I29_RS13330 | pilN | 2832654..2833313 (-) | 660 | WP_005018044.1 | PilN domain-containing protein | Machinery gene |
| C6I29_RS13335 | pilM | 2833313..2834371 (-) | 1059 | WP_005018042.1 | pilus assembly protein PilM | Machinery gene |
| C6I29_RS13340 | ponA | 2834533..2837079 (+) | 2547 | WP_034688125.1 | penicillin-binding protein PBP1a | - |
| C6I29_RS13345 | - | 2837126..2837932 (-) | 807 | WP_034669839.1 | putative RNA methyltransferase | - |
Sequence
Protein
Download Length: 219 a.a. Molecular weight: 24229.61 Da Isoelectric Point: 4.6921
>NTDB_id=276623 C6I29_RS13330 WP_005018044.1 2832654..2833313(-) (pilN) [Acinetobacter radioresistens strain DSSKY-A-001]
MTTINLLPWRDELREQRKKQFIIICIGVALLGLAGVVLTWMYYDRKLDDQEQANQLIISTNQNLDIQLKSLDGLQEQRDA
IIERMNLIQGLQGKRPVTVRLVDELARVIPANMYLTKFARTGDKFTLEGKAESPNTVAELLRGLEASPWYRNAFMNSFLA
AEEKKEQTPTSLIPRPEENYGSFVVTVDAGEIAADSPPSADPNAPTNTAATGPAAGAAQ
MTTINLLPWRDELREQRKKQFIIICIGVALLGLAGVVLTWMYYDRKLDDQEQANQLIISTNQNLDIQLKSLDGLQEQRDA
IIERMNLIQGLQGKRPVTVRLVDELARVIPANMYLTKFARTGDKFTLEGKAESPNTVAELLRGLEASPWYRNAFMNSFLA
AEEKKEQTPTSLIPRPEENYGSFVVTVDAGEIAADSPPSADPNAPTNTAATGPAAGAAQ
Nucleotide
Download Length: 660 bp
>NTDB_id=276623 C6I29_RS13330 WP_005018044.1 2832654..2833313(-) (pilN) [Acinetobacter radioresistens strain DSSKY-A-001]
ATGACAACAATTAACCTGCTCCCTTGGCGTGATGAGCTAAGGGAACAACGGAAAAAGCAATTTATTATTATTTGTATTGG
GGTGGCATTACTAGGTTTAGCCGGAGTGGTACTGACCTGGATGTACTATGACCGCAAGCTGGATGATCAGGAACAAGCTA
ATCAACTGATTATCAGTACTAACCAGAACCTGGATATACAGCTTAAATCTCTAGATGGCCTGCAAGAACAGCGTGATGCC
ATTATTGAGCGCATGAACCTGATTCAGGGCTTACAGGGTAAACGTCCGGTTACTGTTCGTTTGGTGGATGAGCTGGCACG
TGTAATCCCAGCCAATATGTATCTGACCAAATTTGCACGGACTGGTGATAAATTCACTCTCGAAGGGAAGGCAGAAAGCC
CGAACACTGTAGCTGAGCTTTTGCGTGGACTAGAAGCTTCACCTTGGTATCGTAATGCCTTTATGAACTCATTCCTTGCC
GCGGAAGAAAAGAAAGAGCAGACCCCAACTTCGCTGATACCCCGACCAGAAGAAAACTATGGCAGTTTTGTTGTAACTGT
AGATGCAGGTGAGATTGCTGCTGATAGTCCGCCATCGGCTGATCCCAATGCACCAACCAATACAGCAGCAACGGGTCCTG
CAGCGGGAGCAGCACAATGA
ATGACAACAATTAACCTGCTCCCTTGGCGTGATGAGCTAAGGGAACAACGGAAAAAGCAATTTATTATTATTTGTATTGG
GGTGGCATTACTAGGTTTAGCCGGAGTGGTACTGACCTGGATGTACTATGACCGCAAGCTGGATGATCAGGAACAAGCTA
ATCAACTGATTATCAGTACTAACCAGAACCTGGATATACAGCTTAAATCTCTAGATGGCCTGCAAGAACAGCGTGATGCC
ATTATTGAGCGCATGAACCTGATTCAGGGCTTACAGGGTAAACGTCCGGTTACTGTTCGTTTGGTGGATGAGCTGGCACG
TGTAATCCCAGCCAATATGTATCTGACCAAATTTGCACGGACTGGTGATAAATTCACTCTCGAAGGGAAGGCAGAAAGCC
CGAACACTGTAGCTGAGCTTTTGCGTGGACTAGAAGCTTCACCTTGGTATCGTAATGCCTTTATGAACTCATTCCTTGCC
GCGGAAGAAAAGAAAGAGCAGACCCCAACTTCGCTGATACCCCGACCAGAAGAAAACTATGGCAGTTTTGTTGTAACTGT
AGATGCAGGTGAGATTGCTGCTGATAGTCCGCCATCGGCTGATCCCAATGCACCAACCAATACAGCAGCAACGGGTCCTG
CAGCGGGAGCAGCACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
71.364 |
100 |
0.717 |
| comN | Acinetobacter baylyi ADP1 |
68.545 |
97.26 |
0.667 |