Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | C6I29_RS13320 | Genome accession | NZ_CP027365 |
| Coordinates | 2831423..2831950 (-) | Length | 175 a.a. |
| NCBI ID | WP_005018049.1 | Uniprot ID | A0A062BZX0 |
| Organism | Acinetobacter radioresistens strain DSSKY-A-001 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2826423..2836950
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6I29_RS13300 | - | 2826662..2827525 (-) | 864 | WP_105919100.1 | hypothetical protein | - |
| C6I29_RS13305 | aroB | 2827533..2828618 (-) | 1086 | WP_005024217.1 | 3-dehydroquinate synthase | - |
| C6I29_RS14900 | aroK | 2828637..2829188 (-) | 552 | WP_005024215.1 | shikimate kinase AroK | - |
| C6I29_RS13315 | pilQ | 2829225..2831405 (-) | 2181 | WP_005024212.1 | type IV pilus secretin PilQ | Machinery gene |
| C6I29_RS13320 | pilP | 2831423..2831950 (-) | 528 | WP_005018049.1 | pilus assembly protein PilP | Machinery gene |
| C6I29_RS13325 | comO | 2831947..2832657 (-) | 711 | WP_005404626.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| C6I29_RS13330 | pilN | 2832654..2833313 (-) | 660 | WP_005018044.1 | PilN domain-containing protein | Machinery gene |
| C6I29_RS13335 | pilM | 2833313..2834371 (-) | 1059 | WP_005018042.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19435.61 Da Isoelectric Point: 7.7737
>NTDB_id=276621 C6I29_RS13320 WP_005018049.1 2831423..2831950(-) (pilP) [Acinetobacter radioresistens strain DSSKY-A-001]
MTWNKIILGLCCGMILVGCDSRIDAVNEEMAVIRNQPPLPIEPAPVFSPVPTFAYAAHQFRSPFLPSSLAAELKVMAGKR
VYPNFSRQPQPLESYALESLNMKGSMRNSRGQIIALIQTPDGQIEQVQRGNYMGMHHGRIVQITPTQIDLVEIIPDGREG
YVERPRSLVLIGPQP
MTWNKIILGLCCGMILVGCDSRIDAVNEEMAVIRNQPPLPIEPAPVFSPVPTFAYAAHQFRSPFLPSSLAAELKVMAGKR
VYPNFSRQPQPLESYALESLNMKGSMRNSRGQIIALIQTPDGQIEQVQRGNYMGMHHGRIVQITPTQIDLVEIIPDGREG
YVERPRSLVLIGPQP
Nucleotide
Download Length: 528 bp
>NTDB_id=276621 C6I29_RS13320 WP_005018049.1 2831423..2831950(-) (pilP) [Acinetobacter radioresistens strain DSSKY-A-001]
ATGACTTGGAATAAGATCATTTTAGGCCTGTGCTGCGGCATGATTCTGGTAGGCTGTGATTCACGTATAGATGCAGTAAA
TGAAGAGATGGCAGTCATTCGTAACCAACCACCTCTACCGATTGAACCGGCACCTGTGTTCAGTCCTGTACCTACATTTG
CTTATGCAGCACATCAGTTCAGAAGTCCATTTTTACCTAGCTCGCTTGCAGCTGAGTTAAAAGTTATGGCCGGGAAGCGG
GTTTATCCGAATTTTTCACGCCAACCCCAACCTCTTGAGAGCTATGCCCTTGAATCTTTAAATATGAAAGGCAGTATGCG
TAATTCAAGAGGGCAGATTATTGCACTAATCCAGACGCCCGATGGCCAGATTGAACAAGTGCAGCGCGGGAACTATATGG
GTATGCATCATGGGCGTATTGTTCAGATTACACCTACCCAGATTGATCTGGTTGAGATCATCCCGGATGGGCGCGAAGGC
TATGTGGAACGTCCCCGCAGTCTAGTACTGATTGGGCCACAGCCTTAA
ATGACTTGGAATAAGATCATTTTAGGCCTGTGCTGCGGCATGATTCTGGTAGGCTGTGATTCACGTATAGATGCAGTAAA
TGAAGAGATGGCAGTCATTCGTAACCAACCACCTCTACCGATTGAACCGGCACCTGTGTTCAGTCCTGTACCTACATTTG
CTTATGCAGCACATCAGTTCAGAAGTCCATTTTTACCTAGCTCGCTTGCAGCTGAGTTAAAAGTTATGGCCGGGAAGCGG
GTTTATCCGAATTTTTCACGCCAACCCCAACCTCTTGAGAGCTATGCCCTTGAATCTTTAAATATGAAAGGCAGTATGCG
TAATTCAAGAGGGCAGATTATTGCACTAATCCAGACGCCCGATGGCCAGATTGAACAAGTGCAGCGCGGGAACTATATGG
GTATGCATCATGGGCGTATTGTTCAGATTACACCTACCCAGATTGATCTGGTTGAGATCATCCCGGATGGGCGCGAAGGC
TATGTGGAACGTCCCCGCAGTCTAGTACTGATTGGGCCACAGCCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
78.857 |
100 |
0.789 |
| comL | Acinetobacter baylyi ADP1 |
72.832 |
98.857 |
0.72 |