Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | C1N50_RS11795 | Genome accession | NZ_CP026321 |
| Coordinates | 2468842..2469129 (-) | Length | 95 a.a. |
| NCBI ID | WP_005425566.1 | Uniprot ID | A0A812FIP9 |
| Organism | Vibrio campbellii strain BoB-53 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2463842..2474129
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1N50_RS11770 (C1N50_11765) | - | 2464283..2465497 (+) | 1215 | WP_029788618.1 | pyridoxal phosphate-dependent aminotransferase | - |
| C1N50_RS11775 (C1N50_11770) | yfbR | 2465581..2466165 (+) | 585 | WP_005425568.1 | 5'-deoxynucleotidase | - |
| C1N50_RS11780 (C1N50_11775) | - | 2466169..2467503 (+) | 1335 | WP_172840961.1 | anti-phage deoxyguanosine triphosphatase | - |
| C1N50_RS11785 (C1N50_11780) | - | 2467524..2468141 (-) | 618 | WP_103413436.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| C1N50_RS11790 (C1N50_11785) | rrtA | 2468145..2468696 (+) | 552 | WP_045377767.1 | rhombosortase | - |
| C1N50_RS11795 (C1N50_11790) | comEA | 2468842..2469129 (-) | 288 | WP_005425566.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| C1N50_RS11800 (C1N50_11795) | ppiD | 2469275..2471134 (-) | 1860 | WP_103413437.1 | peptidylprolyl isomerase | - |
| C1N50_RS11805 (C1N50_11800) | - | 2471349..2471621 (-) | 273 | WP_005430934.1 | HU family DNA-binding protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10534.24 Da Isoelectric Point: 5.8692
>NTDB_id=268137 C1N50_RS11795 WP_005425566.1 2468842..2469129(-) (comEA) [Vibrio campbellii strain BoB-53]
MKWMLTLCLLILAPMSWAETKTKADKYEGIEITVNVNSATAEEIATLLNGIGEKKAQDIVEYRNEHGPFKTAADLTKVKG
IGEATVKKNEDRILL
MKWMLTLCLLILAPMSWAETKTKADKYEGIEITVNVNSATAEEIATLLNGIGEKKAQDIVEYRNEHGPFKTAADLTKVKG
IGEATVKKNEDRILL
Nucleotide
Download Length: 288 bp
>NTDB_id=268137 C1N50_RS11795 WP_005425566.1 2468842..2469129(-) (comEA) [Vibrio campbellii strain BoB-53]
ATGAAATGGATGTTAACGCTGTGCTTATTGATACTCGCGCCGATGAGCTGGGCGGAAACAAAGACTAAAGCAGATAAGTA
TGAAGGTATTGAGATTACGGTTAACGTTAACTCTGCCACTGCAGAAGAGATTGCGACGCTACTTAATGGTATTGGTGAGA
AGAAAGCGCAAGATATTGTTGAGTATCGCAACGAGCACGGTCCATTTAAAACAGCTGCGGATCTTACTAAGGTGAAAGGC
ATCGGTGAGGCGACTGTGAAGAAGAACGAAGACCGCATCCTGCTGTAA
ATGAAATGGATGTTAACGCTGTGCTTATTGATACTCGCGCCGATGAGCTGGGCGGAAACAAAGACTAAAGCAGATAAGTA
TGAAGGTATTGAGATTACGGTTAACGTTAACTCTGCCACTGCAGAAGAGATTGCGACGCTACTTAATGGTATTGGTGAGA
AGAAAGCGCAAGATATTGTTGAGTATCGCAACGAGCACGGTCCATTTAAAACAGCTGCGGATCTTACTAAGGTGAAAGGC
ATCGGTGAGGCGACTGTGAAGAAGAACGAAGACCGCATCCTGCTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio campbellii strain DS40M4 |
96.842 |
100 |
0.968 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
80 |
100 |
0.8 |
| comEA | Vibrio cholerae C6706 |
58.333 |
100 |
0.589 |
| comEA | Vibrio cholerae strain A1552 |
58.333 |
100 |
0.589 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
39.286 |
100 |
0.463 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comEA | Acinetobacter baylyi ADP1 |
48.649 |
77.895 |
0.379 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
56.452 |
65.263 |
0.368 |