Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | C2U37_RS11545 | Genome accession | NZ_CP026228 |
| Coordinates | 2368161..2368478 (-) | Length | 105 a.a. |
| NCBI ID | WP_104452318.1 | Uniprot ID | - |
| Organism | Aeromonas sp. ASNIH1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2363161..2373478
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U37_RS11525 (C2U37_11520) | - | 2363552..2364226 (-) | 675 | WP_039041329.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| C2U37_RS11530 (C2U37_11525) | - | 2364502..2365473 (+) | 972 | WP_104452317.1 | response regulator | - |
| C2U37_RS11535 (C2U37_11530) | - | 2365544..2366941 (-) | 1398 | WP_052815577.1 | peptide MFS transporter | - |
| C2U37_RS11540 (C2U37_11535) | galU | 2367155..2368066 (-) | 912 | WP_010675542.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| C2U37_RS11545 (C2U37_11540) | comEA | 2368161..2368478 (-) | 318 | WP_104452318.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| C2U37_RS11550 (C2U37_11545) | cysQ | 2368643..2369413 (+) | 771 | WP_104452319.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| C2U37_RS11555 (C2U37_11550) | - | 2369474..2369770 (-) | 297 | WP_010675539.1 | YciI family protein | - |
| C2U37_RS11560 (C2U37_11555) | - | 2369795..2370346 (-) | 552 | WP_104452320.1 | septation protein A | - |
| C2U37_RS11565 (C2U37_11560) | - | 2370452..2371957 (-) | 1506 | WP_104452321.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| C2U37_RS11570 (C2U37_11565) | - | 2372148..2372780 (+) | 633 | WP_104452322.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11005.96 Da Isoelectric Point: 10.4470
>NTDB_id=267950 C2U37_RS11545 WP_104452318.1 2368161..2368478(-) (comEA) [Aeromonas sp. ASNIH1]
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKKSGKINLNTASASELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKKSGKINLNTASASELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 318 bp
>NTDB_id=267950 C2U37_RS11545 WP_104452318.1 2368161..2368478(-) (comEA) [Aeromonas sp. ASNIH1]
ATGAACAAGAAGACCCTGATCGCCGCACTGCTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGAAAAGCGGCAAGATCAATCTCAATACCGCCAGTGCCAGCGAGC
TCACCGCCCTGAAAGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAG
ATGAACAAGAAGACCCTGATCGCCGCACTGCTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGAAAAGCGGCAAGATCAATCTCAATACCGCCAGTGCCAGCGAGC
TCACCGCCCTGAAAGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.505 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.505 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.664 |
100 |
0.486 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.946 |
100 |
0.486 |
| comEA | Legionella pneumophila strain ERS1305867 |
44 |
95.238 |
0.419 |
| comEA | Legionella pneumophila str. Paris |
44 |
95.238 |
0.419 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.75 |
91.429 |
0.4 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
54.93 |
67.619 |
0.371 |
| comEA | Acinetobacter baylyi ADP1 |
47.561 |
78.095 |
0.371 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.055 |
69.524 |
0.362 |