Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | C2U39_RS04240 | Genome accession | NZ_CP026222 |
| Coordinates | 835200..835517 (-) | Length | 105 a.a. |
| NCBI ID | WP_103259590.1 | Uniprot ID | - |
| Organism | Aeromonas sp. ASNIH3 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 830200..840517
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U39_RS04220 (C2U39_04220) | - | 830591..831265 (-) | 675 | WP_039041329.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| C2U39_RS04225 (C2U39_04225) | - | 831541..832512 (+) | 972 | WP_029314797.1 | response regulator | - |
| C2U39_RS04230 (C2U39_04230) | - | 832583..833980 (-) | 1398 | WP_041212400.1 | peptide MFS transporter | - |
| C2U39_RS04235 (C2U39_04235) | galU | 834194..835105 (-) | 912 | WP_010675542.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| C2U39_RS04240 (C2U39_04240) | comEA | 835200..835517 (-) | 318 | WP_103259590.1 | ComEA family DNA-binding protein | Machinery gene |
| C2U39_RS04245 (C2U39_04245) | cysQ | 835684..836454 (+) | 771 | WP_103259591.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| C2U39_RS04250 (C2U39_04250) | - | 836518..836814 (-) | 297 | WP_010675539.1 | YciI family protein | - |
| C2U39_RS04255 (C2U39_04255) | - | 836839..837390 (-) | 552 | WP_103259592.1 | septation protein A | - |
| C2U39_RS04260 (C2U39_04260) | - | 837496..839001 (-) | 1506 | WP_103259593.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| C2U39_RS04265 (C2U39_04265) | - | 839193..839825 (+) | 633 | WP_039041319.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11034.91 Da Isoelectric Point: 9.7824
>NTDB_id=267886 C2U39_RS04240 WP_103259590.1 835200..835517(-) (comEA) [Aeromonas sp. ASNIH3]
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASADELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASADELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 318 bp
>NTDB_id=267886 C2U39_RS04240 WP_103259590.1 835200..835517(-) (comEA) [Aeromonas sp. ASNIH3]
ATGAACAAGAAGACCCTGATCGCCGCACTGCTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGACGAGC
TCACCGCCCTGAAGGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
ATGAACAAGAAGACCCTGATCGCCGCACTGCTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGACGAGC
TCACCGCCCTGAAGGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.505 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.505 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
46.729 |
100 |
0.476 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.045 |
100 |
0.476 |
| comEA | Legionella pneumophila strain ERS1305867 |
44 |
95.238 |
0.419 |
| comEA | Legionella pneumophila str. Paris |
44 |
95.238 |
0.419 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.852 |
77.143 |
0.4 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.75 |
91.429 |
0.4 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
54.795 |
69.524 |
0.381 |
| comEA | Acinetobacter baylyi ADP1 |
46.914 |
77.143 |
0.362 |